RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 KNCNA6PVL3 124 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 OR11H12B2RN74 326 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 WIPF1O43516 503 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 IGKV3-20P01619 116 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 IGLC3P0DOY3 106 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 Q8N1Y9 231 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 SPXQ9BT56 116 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 SMIM2Q9BVW6 85 aa7.67□□□□□ -1.18
VPS25-203ENST00000589520 NSD1Q96L73 2696 aaPredicted RBP7.66□□□□□ -1.18
VPS25-203ENST00000589520 TRBV6-5A0A0K0K1A5 114 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 A0A1W2PRX2 142 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 CBY3A6NI87 242 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 M0R143 59 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 VCYO14598 125 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 INSP01308 110 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 MGPP08493 103 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 GATA1P15976 413 aaPredicted RBP7.66□□□□□ -1.18
VPS25-203ENST00000589520 LINC00315P59091 139 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 LINC00173Q6ZV60 143 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 STHQ8IWL8 128 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 RASL10AQ92737 203 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 EDA2RQ9HAV5 297 aa7.66□□□□□ -1.18
VPS25-203ENST00000589520 A8MWV9 139 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 H7C1H1 209 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 IGLV1-51P01701 117 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 ZNF415Q09FC8 603 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 ANK3Q12955 4377 aaKnown RBP7.65□□□□□ -1.18
VPS25-203ENST00000589520 C11orf44Q8N8P7 122 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 MDFICQ9P1T7 246 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 GOLT1BQ9Y3E0 138 aa7.65□□□□□ -1.18
VPS25-203ENST00000589520 TRAV26-2A0A0B4J265 109 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 M0R2P5 195 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 SAP30O75446 220 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 GAS8-AS1O95177 125 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 NUDT3O95989 172 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 IGLL1P15814 213 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 TRPT1Q86TN4 253 aaKnown RBP7.64□□□□□ -1.19
VPS25-203ENST00000589520 TMEM158Q8WZ71 300 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 LINC01587Q99440 93 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 KIR2DL4Q99706 377 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 C2orf88Q9BSF0 95 aa7.64□□□□□ -1.19
VPS25-203ENST00000589520 MRPS16Q9Y3D3 137 aaKnown RBP7.64□□□□□ -1.19
VPS25-203ENST00000589520 RBMY1BA6NDE4 496 aaKnown RBP7.63□□□□□ -1.19
VPS25-203ENST00000589520 RBMY1EA6NEQ0 496 aaKnown RBP7.63□□□□□ -1.19
VPS25-203ENST00000589520 ADARB2-AS1A8MUL3 147 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 F5H697 171 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 CRYGDP07320 174 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 PRSS1P07477 247 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 RBMY1DP0C7P1 496 aaKnown RBP7.63□□□□□ -1.19
VPS25-203ENST00000589520 INSL3P51460 131 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 HNRNPA3P51991 378 aaKnown RBP7.63□□□□□ -1.19
VPS25-203ENST00000589520 POLR2KP53803 58 aaKnown RBP7.63□□□□□ -1.19
VPS25-203ENST00000589520 ODF3L2Q3SX64 289 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 ZNF876PQ49A33 203 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 SPATA3Q8NHX4 192 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 SMR3AQ99954 134 aa7.63□□□□□ -1.19
VPS25-203ENST00000589520 TRAV12-1A0A0B4J245 112 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.62□□□□□ -1.19
VPS25-203ENST00000589520 RHODO00212 210 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 CRLF1O75462 422 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 BEAN1Q3B7T3 259 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 SUMO4Q6EEV6 95 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 MORN3Q6PF18 240 aaPredicted RBP7.62□□□□□ -1.19
VPS25-203ENST00000589520 Q6ZN92 141 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 PRIMA1Q86XR5 153 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 TOMM6Q96B49 74 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 C1QTNF4Q9BXJ3 329 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 CSTL1Q9H114 145 aa7.62□□□□□ -1.19
VPS25-203ENST00000589520 FLNAP21333 2647 aaKnown RBP7.62□□□□□ -1.19
VPS25-203ENST00000589520 TRBV27A0A0K0K1C4 114 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 H0Y8G0 127 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 M0QY20 66 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 PF4P02776 101 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 FXYD7P58549 80 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 NSUN5P1Q3KNT7 163 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 SLC25A34Q6PIV7 304 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 ZMAT4Q9H898 229 aa7.61□□□□□ -1.19
VPS25-203ENST00000589520 A0A087WWL8 130 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 INAFM1C9JVW0 142 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 CIDEAO60543 219 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 RBMY1A1P0DJD3 496 aaKnown RBP7.6□□□□□ -1.19
VPS25-203ENST00000589520 RBMY1CP0DJD4 496 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 RBMY1FQ15415 496 aaKnown RBP7.6□□□□□ -1.19
VPS25-203ENST00000589520 RHOHQ15669 191 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 ZNF56Q15929 161 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 ERASQ7Z444 233 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 RPL39LQ96EH5 51 aaKnown RBP7.6□□□□□ -1.19
VPS25-203ENST00000589520 TMEM141Q96I45 108 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 SCGB3A1Q96QR1 104 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 TMEM208Q9BTX3 173 aa7.6□□□□□ -1.19
VPS25-203ENST00000589520 MXRA5Q9NR99 2828 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 A0A087WX48 190 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 SDHAF1A6NFY7 115 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 SIVA1O15304 175 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 DLEU1O43261 78 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 SPRY2O43597 315 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 DPM2O94777 84 aa7.59□□□□□ -1.19
VPS25-203ENST00000589520 IGKCP01834 107 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms