RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
DNMT1-220ENST00000589351 SLC38A11Q08AI6 406 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 LINC00242Q5T6M2 205 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 TMEM14EPQ6UXP3 125 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 Q6ZVH6 145 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 VGLL1Q99990 258 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 SPANXB1Q9NS25 103 aaPredicted RBP3.76□□□□□ -1.81
DNMT1-220ENST00000589351 GSKIPQ9P0R6 139 aa3.76□□□□□ -1.81
DNMT1-220ENST00000589351 APOBP04114 4563 aaKnown RBP3.76□□□□□ -1.81
DNMT1-220ENST00000589351 IGHV1OR15-1A0A075B7D0 117 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 NAP1L6A6NFF2 107 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 C9JCJ5 164 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 H3BQ15 152 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 SLC17A3O00476 420 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 IGHV3-53P01767 116 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 CRYGDP07320 174 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 DNAH10OSP0CZ25 163 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 IGLC2P0DOY2 106 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 FUSP35637 526 aaKnown RBP eCLIP3.75□□□□□ -1.81
DNMT1-220ENST00000589351 KRTAP10-5P60370 271 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 PDE6HQ13956 83 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 ZNF846Q147U1 533 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 IAH1Q2TAA2 248 aaPredicted RBP3.75□□□□□ -1.81
DNMT1-220ENST00000589351 CNPY1Q3B7I2 92 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 C9orf47Q6ZRZ4 202 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 NIT1Q86X76 327 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 C11orf72Q8NBR9 251 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 DEFB104AQ8WTQ1 72 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 SOSTQ9BQB4 213 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 SH3BGRL3Q9H299 93 aa3.75□□□□□ -1.81
DNMT1-220ENST00000589351 DMBT1Q9UGM3 2413 aaPredicted RBP3.75□□□□□ -1.81
DNMT1-220ENST00000589351 TRBV19A0A075B6N1 114 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 IGHV3-38A0A0C4DH36 116 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 LINC00587B1AMM8 73 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 KLLNB2CW77 178 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 K7EQD1 137 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 TAAR5O14804 337 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 CCNKO75909 580 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 C1QBP02746 253 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 LINC00614P0C842 121 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 CRISP2P16562 243 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 S100A11P31949 105 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 RPL29P47914 159 aaKnown RBP3.74□□□□□ -1.81
DNMT1-220ENST00000589351 ERCC8Q13216 396 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 BTN1A1Q13410 526 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 TDRG1Q3Y452 100 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 MTURNQ8N3F0 131 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 GATD1Q8NB37 220 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 MGST2Q99735 147 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 SLC25A31Q9H0C2 315 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 AGPAT4-IT1Q9H0P7 198 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 SLC39A9Q9NUM3 307 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 UQCC1Q9NVA1 299 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 MRPL16Q9NX20 251 aaKnown RBP3.74□□□□□ -1.81
DNMT1-220ENST00000589351 TMEM14CQ9P0S9 112 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 DNAH5Q8TE73 4624 aa3.74□□□□□ -1.81
DNMT1-220ENST00000589351 HERC1Q15751 4861 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 A0A1B0GWB2 263 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 C7orf66A4D0T2 115 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 M0R3E3 92 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 PFN1P07737 140 aaKnown RBP3.73□□□□□ -1.81
DNMT1-220ENST00000589351 OR5AL1P0C617 328 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 RAB5AP20339 215 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 RPL12P30050 165 aaKnown RBP3.73□□□□□ -1.81
DNMT1-220ENST00000589351 CSN1S1P47710 185 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 ZNF138P52744 262 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 HBG1P69891 147 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 HBG2P69892 147 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 BAXQ07812 192 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 MIC13Q5XKP0 118 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 WFDC10BQ8IUB3 73 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 OR10G4Q8NGN3 311 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 BLNKQ8WV28 456 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 SEC22CQ9BRL7 303 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 SLIRPQ9GZT3 109 aaKnown RBP3.73□□□□□ -1.81
DNMT1-220ENST00000589351 ZNF492Q9P255 531 aa3.73□□□□□ -1.81
DNMT1-220ENST00000589351 TRAV4A0A0B4J268 109 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 IBA57-AS1B1ANH7 110 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 EIF3GO75821 320 aaKnown RBP eCLIP3.72□□□□□ -1.81
DNMT1-220ENST00000589351 NDUFB6O95139 128 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 TSHBP01222 138 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 Q8N814 137 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 PRSS3P2Q8NHM4 247 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 MRAP2Q96G30 205 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 SFRP2Q96HF1 295 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 FAM19A4Q96LR4 140 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 KIR2DL4Q99706 377 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 WFDC1Q9HC57 220 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 TP53TG3Q9ULZ0 132 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 LSM5Q9Y4Y9 91 aaKnown RBP3.72□□□□□ -1.81
DNMT1-220ENST00000589351 LENEPQ9Y5L5 61 aa3.72□□□□□ -1.81
DNMT1-220ENST00000589351 FAM240AA0A1B0GVK7 77 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 A6NDN8 102 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 M0R2P5 195 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 CST7O76096 145 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 SFTA3P0C7M3 94 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 ESDP10768 282 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 SCGB1A1P11684 91 aa3.71□□□□□ -1.82
DNMT1-220ENST00000589351 FGF7P21781 194 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms