RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
PTPN2-208ENST00000589216 C19orf71A6NCJ1 209 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 GAGE12JA6NER3 117 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 TEX46H3BTG2 121 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 SNAI2O43623 268 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 IFNA1P01562 189 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 CRYGDP07320 174 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 CXCL1P09341 107 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 GAGE1Q13065 139 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 GAGE4Q13068 117 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 GAGE5Q13069 117 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 GAGE13Q4V321 117 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 ZFP82Q8N141 532 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 SYT8Q8NBV8 401 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 SFRP2Q96HF1 295 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 PRADC1Q9BSG0 188 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 VAX2Q9UIW0 290 aa6.69□□□□□ -1.34
PTPN2-208ENST00000589216 RBFOX3A6NFN3 312 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 RHODO00212 210 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 PDE6DO43924 150 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 CIDEAO60543 219 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 DNAH10OSP0CZ25 163 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 GNG4P50150 75 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 TIRAPP58753 221 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 MED9Q9NWA0 146 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 LY96Q9Y6Y9 160 aa6.68□□□□□ -1.34
PTPN2-208ENST00000589216 K7EN84 100 aa6.67□□□□□ -1.34
PTPN2-208ENST00000589216 IGLC6P0CF74 106 aa6.67□□□□□ -1.34
PTPN2-208ENST00000589216 SSTP61278 116 aa6.67□□□□□ -1.34
PTPN2-208ENST00000589216 ATP6V0E2Q8NHE4 81 aa6.67□□□□□ -1.34
PTPN2-208ENST00000589216 LYPD6BQ8NI32 183 aa6.67□□□□□ -1.34
PTPN2-208ENST00000589216 SSBP4Q9BWG4 385 aaPredicted RBP6.67□□□□□ -1.34
PTPN2-208ENST00000589216 OR5AL1P0C617 328 aa6.66□□□□□ -1.34
PTPN2-208ENST00000589216 FUSP35637 526 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTPN2-208ENST00000589216 KRTAP10-2P60368 255 aa6.66□□□□□ -1.34
PTPN2-208ENST00000589216 TOR2AQ5JU69 321 aa6.66□□□□□ -1.34
PTPN2-208ENST00000589216 SH2D6Q7Z4S9 175 aa6.66□□□□□ -1.34
PTPN2-208ENST00000589216 OR2D3Q8NGH3 330 aa6.66□□□□□ -1.34
PTPN2-208ENST00000589216 GTSF1LQ9H1H1 148 aa6.66□□□□□ -1.34
PTPN2-208ENST00000589216 RYR1P21817 5038 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 IGHV3-38A0A0C4DH36 116 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 IGHV3-33P01772 117 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 IGHV3-30-3P0DP02 117 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 BLOC1S1P78537 153 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 ZNF56Q15929 161 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 OR10J3Q5JRS4 329 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 LELP1Q5T871 98 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 SPATA12Q7Z6I5 190 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 SMIM12Q96EX1 92 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 TPPP3Q9BW30 176 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 MSRB1Q9NZV6 116 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 KIF25-AS1Q9Y6Z4 181 aa6.65□□□□□ -1.34
PTPN2-208ENST00000589216 EVI2AP22794 236 aa6.64□□□□□ -1.35
PTPN2-208ENST00000589216 TAGLN2P37802 199 aaKnown RBP6.64□□□□□ -1.35
PTPN2-208ENST00000589216 SPANXN1Q5VSR9 72 aa6.64□□□□□ -1.35
PTPN2-208ENST00000589216 FER1L6-AS1Q8NA97 138 aa6.64□□□□□ -1.35
PTPN2-208ENST00000589216 RNASE7Q9H1E1 156 aaKnown RBP6.64□□□□□ -1.35
PTPN2-208ENST00000589216 DNAH5Q8TE73 4624 aa6.64□□□□□ -1.35
PTPN2-208ENST00000589216 LRP1BQ9NZR2 4599 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 TRAV8-6A0A0B4J262 113 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 C16orf90A8MZG2 172 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 TMEM250H0YL14 139 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 P01737 135 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 BTF3P20290 206 aaKnown RBP6.63□□□□□ -1.35
PTPN2-208ENST00000589216 CTRLP40313 264 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 CEBPGP53567 150 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 UBE2D3P61077 147 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 UBE2D2P62837 147 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 NEXN-AS1Q8NBZ9 246 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 NUDT10Q8NFP7 164 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 OCC1Q8TAD7 63 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 NUDT11Q96G61 164 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 AP1S3Q96PC3 154 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 KRTAP17-1Q9BYP8 105 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 PCLOQ9Y6V0 5065 aa6.63□□□□□ -1.35
PTPN2-208ENST00000589216 RPS20P60866 119 aaKnown RBP6.62□□□□□ -1.35
PTPN2-208ENST00000589216 RAB4BP61018 213 aa6.62□□□□□ -1.35
PTPN2-208ENST00000589216 OR10G8Q8NGN5 311 aa6.62□□□□□ -1.35
PTPN2-208ENST00000589216 DAZAP1Q96EP5 407 aaKnown RBP6.62□□□□□ -1.35
PTPN2-208ENST00000589216 FAM210AQ96ND0 272 aa6.62□□□□□ -1.35
PTPN2-208ENST00000589216 RPP21Q9H633 154 aaKnown RBP6.62□□□□□ -1.35
PTPN2-208ENST00000589216 Q9HAA7 133 aa6.62□□□□□ -1.35
PTPN2-208ENST00000589216 TRBV10-1A0A0K0K1A3 114 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 IBA57-AS1B1ANH7 110 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 MGPP08493 103 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 LYZL1Q6UWQ5 148 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 DAZ4Q86SG3 579 aaKnown RBP6.61□□□□□ -1.35
PTPN2-208ENST00000589216 C10orf126Q8N4M7 172 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 GTSF1Q8WW33 167 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 DNAJC30Q96LL9 226 aa6.61□□□□□ -1.35
PTPN2-208ENST00000589216 DAZ3Q9NR90 486 aaKnown RBP6.61□□□□□ -1.35
PTPN2-208ENST00000589216 HSPG2P98160 4391 aa6.6□□□□□ -1.35
PTPN2-208ENST00000589216 TRBV7-3A0A075B6L6 115 aa6.6□□□□□ -1.35
PTPN2-208ENST00000589216 TRAV9-2A0A087WT02 112 aa6.6□□□□□ -1.35
PTPN2-208ENST00000589216 A0A087WTM6 91 aa6.6□□□□□ -1.35
PTPN2-208ENST00000589216 C9JQL5 133 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 828.8 ms