RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PRO1933Q9H354 126 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 DPH3P1Q9H4G8 78 aa6.46□□□□□ -1.38
SMAD4-206ENST00000588860 TRGV11A0A075B6L2 103 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 CBY3A6NI87 242 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 OR11H12B2RN74 326 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 PAX4O43316 350 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 LEPROTL1O95214 131 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 PF4P02776 101 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 RBMY1A1P0DJD3 496 aaKnown RBP6.45□□□□□ -1.38
SMAD4-206ENST00000588860 RBMY1CP0DJD4 496 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 PKIAP61925 76 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 RBMY1FQ15415 496 aaKnown RBP6.45□□□□□ -1.38
SMAD4-206ENST00000588860 KRTAP24-1Q3LI83 254 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 LINC00173Q6ZV60 143 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 Q8N1Y9 231 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 C14orf178Q8N769 122 aaPredicted RBP6.45□□□□□ -1.38
SMAD4-206ENST00000588860 Q8N976 141 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 SYT8Q8NBV8 401 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 C9orf85Q96MD7 179 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 MDFICQ9P1T7 246 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 NACAE9PAV3 2078 aa6.45□□□□□ -1.38
SMAD4-206ENST00000588860 TSTD3H0UI37 97 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 CRXO43186 299 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-206ENST00000588860 INSP01308 110 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 SMIM17P0DL12 118 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 BTF3P20290 206 aaKnown RBP6.44□□□□□ -1.38
SMAD4-206ENST00000588860 CMC4P56277 68 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-206ENST00000588860 TEX43Q6ZNM6 134 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 STHQ8IWL8 128 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-206ENST00000588860 NRACQ8N912 160 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 NXT2Q9NPJ8 142 aaKnown RBP6.44□□□□□ -1.38
SMAD4-206ENST00000588860 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
SMAD4-206ENST00000588860 NBEAL2Q6ZNJ1 2754 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 LINC00587B1AMM8 73 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 IGLV1-51P01701 117 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 HTN1P15515 57 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 ZNF664Q8N3J9 261 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 LINC00482Q8N8I6 264 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 Q8N8P6 123 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 CLUHP3Q96NS8 147 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 TMEM70Q9BUB7 260 aa6.43□□□□□ -1.38
SMAD4-206ENST00000588860 A0A087WWL8 130 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 C20orf202A1L168 122 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 LINC01546A6NGU7 62 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 HBDP02042 147 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 ZNF415Q09FC8 603 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 LCE1DQ5T752 114 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 SPATA12Q7Z6I5 190 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 TRPT1Q86TN4 253 aaKnown RBP6.42□□□□□ -1.38
SMAD4-206ENST00000588860 RPL39LQ96EH5 51 aaKnown RBP6.42□□□□□ -1.38
SMAD4-206ENST00000588860 LINC01587Q99440 93 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 VAMP8Q9BV40 100 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 MAP1LC3CQ9BXW4 147 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 JPT2Q9H910 190 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 KIF25-AS1Q9Y6Z4 181 aa6.42□□□□□ -1.38
SMAD4-206ENST00000588860 A0A096LNJ9 63 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 F5H697 171 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 H0Y8G0 127 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 SYS1-DBNDD2H3BUS1 97 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 BEAN1Q3B7T3 259 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 ATOH7Q8N100 152 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 POM121L12Q8N7R1 296 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 RASL10AQ92737 203 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 C20orf144Q9BQM9 153 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 SMIM2Q9BVW6 85 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 XCL2Q9UBD3 114 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 PAM16Q9Y3D7 125 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 MGAM2Q2M2H8 2515 aa6.41□□□□□ -1.38
SMAD4-206ENST00000588860 IGLV2-18A0A075B6J9 118 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 KIR2DL5BA0A0G2JN68 375 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 KIR2DL5BA0A0G2JPC4 375 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 PRSS47A8MTI9 375 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 PRM2P04554 102 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 DDTP30046 118 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 FCER1GP30273 86 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 LINC00315P59091 139 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 ZNF56Q15929 161 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 ZNF876PQ49A33 203 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 FAM74A4Q5TZK3 123 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 SUMO4Q6EEV6 95 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 PET117Q6UWS5 81 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 KIR2DL5AQ8N109 375 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 C20orf78Q9BR46 151 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 LINC00467Q9BRT7 94 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 TMEM208Q9BTX3 173 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 ZNF747Q9BV97 191 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 WFDC10AQ9H1F0 79 aa6.4□□□□□ -1.38
SMAD4-206ENST00000588860 TCAPO15273 167 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 PPP1R17O96001 155 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 RPL35AP18077 110 aaKnown RBP6.39□□□□□ -1.39
SMAD4-206ENST00000588860 SUMO2P61956 95 aaKnown RBP6.39□□□□□ -1.39
SMAD4-206ENST00000588860 NUTF2P61970 127 aaKnown RBP6.39□□□□□ -1.39
SMAD4-206ENST00000588860 LAGE3Q14657 143 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 SPATA45Q537H7 98 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 DEFB125Q8N687 156 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 IFI27L1Q96BM0 104 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 FAM110AQ9BQ89 295 aa6.39□□□□□ -1.39
SMAD4-206ENST00000588860 ST20Q9HBF5 79 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms