RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 TWIST1Q15672 202 aa6.36□□□□□ -1.39
CIRBP-218ENST00000588344 NDUFA5Q16718 116 aa6.36□□□□□ -1.39
CIRBP-218ENST00000588344 AP1S3Q96PC3 154 aa6.36□□□□□ -1.39
CIRBP-218ENST00000588344 APLNQ9ULZ1 77 aa6.36□□□□□ -1.39
CIRBP-218ENST00000588344 A0A1B0GW15 77 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 SMIM27A0A1W2PRY6 76 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 HIGD1CA8MV81 97 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 CRYGDP07320 174 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 GATA1P15976 413 aaPredicted RBP6.35□□□□□ -1.39
CIRBP-218ENST00000588344 RAB4BP61018 213 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 RHOHQ15669 191 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 MRPL23Q16540 153 aaKnown RBP6.35□□□□□ -1.39
CIRBP-218ENST00000588344 C10orf91Q5T1B1 145 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 LGALS9CQ6DKI2 356 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 GTSF1Q8WW33 167 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 CTDSP1Q9GZU7 261 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 ICOSQ9Y6W8 199 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 CSMD3Q7Z407 3707 aa6.35□□□□□ -1.39
CIRBP-218ENST00000588344 A0A0J9YY99 117 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 TRBV10-1A0A0K0K1A3 114 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 A0A1B0GUT8 65 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 NUDT3O95989 172 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 CCL18P55774 89 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 FAM3BP58499 235 aaPredicted RBP6.34□□□□□ -1.39
CIRBP-218ENST00000588344 RIGQ13278 110 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 RNF212Q495C1 297 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 UFSP1Q6NVU6 142 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 C14orf178Q8N769 122 aaPredicted RBP6.34□□□□□ -1.39
CIRBP-218ENST00000588344 SLC25A29Q8N8R3 303 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 FRZBQ92765 325 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 VSIG2Q96IQ7 327 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 PGLYRP4Q96LB8 373 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 IMMP2LQ96T52 175 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 TMEM242Q9NWH2 141 aa6.34□□□□□ -1.39
CIRBP-218ENST00000588344 CARHSP1Q9Y2V2 147 aaKnown RBP6.34□□□□□ -1.39
CIRBP-218ENST00000588344 DYNC2H1Q8NCM8 4307 aaKnown RBP6.33□□□□□ -1.4
CIRBP-218ENST00000588344 A0A087WWL8 130 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 IGHV3-73A0A0B4J1V6 119 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 MUC21A0A0G2JKD1 596 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 MUC21A0A140T8X8 626 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 H7C1H1 209 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 S100A8P05109 93 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 SSTP61278 116 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 FAM74A4Q5TZK3 123 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 NEGR1Q7Z3B1 354 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 NUP35Q8NFH5 326 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 SAMD10Q9BYL1 202 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 DPH3P1Q9H4G8 78 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 JPT2Q9H910 190 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 KIF25-AS1Q9Y6Z4 181 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 STARD9Q9P2P6 4700 aa6.33□□□□□ -1.4
CIRBP-218ENST00000588344 F5H697 171 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 K7EQD1 137 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 GYPEP15421 78 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 ADCYAP1P18509 176 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 SRIP30626 198 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 RHEBQ15382 184 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 SVBPQ8N300 66 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.32□□□□□ -1.4
CIRBP-218ENST00000588344 MSRB1Q9NZV6 116 aa6.32□□□□□ -1.4
CIRBP-218ENST00000588344 A0A087WWC5 75 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 A0A096LPF7 62 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 EVI2AP22794 236 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 TIRAPP58753 221 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 RPL36AP83881 106 aaKnown RBP6.31□□□□□ -1.4
CIRBP-218ENST00000588344 ZNF56Q15929 161 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 KCNIP4Q6PIL6 250 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 ATP5L2Q7Z4Y8 100 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
CIRBP-218ENST00000588344 BTF3L4Q96K17 158 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 DNAJC30Q96LL9 226 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 TMEM191AQ9H0A3 160 aa6.31□□□□□ -1.4
CIRBP-218ENST00000588344 TRBV7-3A0A075B6L6 115 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 TRAV9-1A0A075B6T8 112 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 LCE6AA0A183 80 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 SNAPINO95295 136 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 LY6G6CO95867 125 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 S100PP25815 95 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 LINC00315P59091 139 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 PLECQ15149 4684 aaKnown RBP6.3□□□□□ -1.4
CIRBP-218ENST00000588344 Q6ZSN1 163 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 UBE2DNLQ8IWF7 75 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 CLRN3Q8NCR9 226 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 LINC00476Q8WZB0 136 aa6.3□□□□□ -1.4
CIRBP-218ENST00000588344 C7orf77A4D0Y5 90 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 PPP1R17O96001 155 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 APOC3P02656 99 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 MGPP08493 103 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 TMEM97Q5BJF2 176 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 RASL11AQ6T310 242 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 LYPD5Q6UWN5 251 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 ATP6V0E2Q8NHE4 81 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 TNFRSF18Q9Y5U5 241 aa6.29□□□□□ -1.4
CIRBP-218ENST00000588344 GAGE12JA6NER3 117 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 M0QY20 66 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 HBBP68871 147 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 GAGE1Q13065 139 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 GAGE4Q13068 117 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 GAGE5Q13069 117 aa6.28□□□□□ -1.4
CIRBP-218ENST00000588344 ESRGQ1W209 222 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms