RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 Q9HAA7 133 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 PHLDA3Q9Y5J5 127 aa12.11□□□□□ -0.47
SRSF1-208ENST00000584773 C10orf126Q8N4M7 172 aa12.1□□□□□ -0.47
SRSF1-208ENST00000584773 K7EP13 123 aa12.09□□□□□ -0.47
SRSF1-208ENST00000584773 EREGO14944 169 aa12.09□□□□□ -0.47
SRSF1-208ENST00000584773 SFRP2Q96HF1 295 aa12.09□□□□□ -0.47
SRSF1-208ENST00000584773 MLST8Q9BVC4 326 aa12.09□□□□□ -0.47
SRSF1-208ENST00000584773 IBA57-AS1B1ANH7 110 aa12.08□□□□□ -0.48
SRSF1-208ENST00000584773 EIF5AP63241 154 aaKnown RBP12.08□□□□□ -0.48
SRSF1-208ENST00000584773 PRR27Q6MZM9 219 aa12.08□□□□□ -0.48
SRSF1-208ENST00000584773 BAGE2Q86Y30 109 aa12.08□□□□□ -0.48
SRSF1-208ENST00000584773 DERL1Q9BUN8 251 aa12.08□□□□□ -0.48
SRSF1-208ENST00000584773 GNG13Q9P2W3 67 aa12.08□□□□□ -0.48
SRSF1-208ENST00000584773 MUC21A0A0G2JKD1 596 aa12.07□□□□□ -0.48
SRSF1-208ENST00000584773 MUC21A0A140T8X8 626 aa12.07□□□□□ -0.48
SRSF1-208ENST00000584773 PGPEP1Q9NXJ5 209 aa12.07□□□□□ -0.48
SRSF1-208ENST00000584773 RHODO00212 210 aa12.06□□□□□ -0.48
SRSF1-208ENST00000584773 ZFP82Q8N141 532 aa12.06□□□□□ -0.48
SRSF1-208ENST00000584773 OR10AG1Q8NH19 301 aa12.06□□□□□ -0.48
SRSF1-208ENST00000584773 LRCOL1A6NCL2 159 aa12.05□□□□□ -0.48
SRSF1-208ENST00000584773 PSCAO43653 123 aa12.05□□□□□ -0.48
SRSF1-208ENST00000584773 S100A9P06702 114 aaKnown RBP12.05□□□□□ -0.48
SRSF1-208ENST00000584773 RPL35P42766 123 aaKnown RBP12.05□□□□□ -0.48
SRSF1-208ENST00000584773 KRTAP10-1P60331 282 aa12.05□□□□□ -0.48
SRSF1-208ENST00000584773 SSTP61278 116 aa12.04□□□□□ -0.48
SRSF1-208ENST00000584773 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
SRSF1-208ENST00000584773 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
SRSF1-208ENST00000584773 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
SRSF1-208ENST00000584773 CDPF1Q6NVV7 123 aa12.03□□□□□ -0.48
SRSF1-208ENST00000584773 Q8N1X5 172 aa12.03□□□□□ -0.48
SRSF1-208ENST00000584773 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
SRSF1-208ENST00000584773 SULT1A2P50226 295 aa12.02□□□□□ -0.49
SRSF1-208ENST00000584773 C11orf52Q96A22 123 aa12.02□□□□□ -0.49
SRSF1-208ENST00000584773 FAT1Q14517 4588 aa12.01□□□□□ -0.49
SRSF1-208ENST00000584773 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
SRSF1-208ENST00000584773 WFDC2Q14508 124 aa12.01□□□□□ -0.49
SRSF1-208ENST00000584773 CENPWQ5EE01 88 aa12.01□□□□□ -0.49
SRSF1-208ENST00000584773 DNAJC30Q96LL9 226 aa12.01□□□□□ -0.49
SRSF1-208ENST00000584773 hCG_2014768A0A024R1R8 64 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 RAB19A4D1S5 217 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 SNAI2O43623 268 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 IGLV2-8P01709 118 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 CXCL1P09341 107 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 GZMBP10144 247 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 XGP55808 180 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 HAMPP81172 84 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 ZNF56Q15929 161 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 Q6ZNX1 250 aa12□□□□□ -0.49
SRSF1-208ENST00000584773 DNAH8Q96JB1 4490 aa11.99□□□□□ -0.49
SRSF1-208ENST00000584773 C1QBP02746 253 aa11.99□□□□□ -0.49
SRSF1-208ENST00000584773 RAB5CP51148 216 aa11.99□□□□□ -0.49
SRSF1-208ENST00000584773 SSBP4Q9BWG4 385 aaPredicted RBP11.99□□□□□ -0.49
SRSF1-208ENST00000584773 RBFOX3A6NFN3 312 aa11.98□□□□□ -0.49
SRSF1-208ENST00000584773 UBE2D3P61077 147 aa11.98□□□□□ -0.49
SRSF1-208ENST00000584773 UBE2D2P62837 147 aa11.98□□□□□ -0.49
SRSF1-208ENST00000584773 LAGE3Q14657 143 aa11.98□□□□□ -0.49
SRSF1-208ENST00000584773 SPANXN1Q5VSR9 72 aa11.98□□□□□ -0.49
SRSF1-208ENST00000584773 EIF5AL1Q6IS14 154 aaKnown RBP11.98□□□□□ -0.49
SRSF1-208ENST00000584773 Q8N814 137 aa11.98□□□□□ -0.49
SRSF1-208ENST00000584773 A0A087WWC5 75 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 IGLV5-52A0A0A0MRZ9 124 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 LECT2O14960 151 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 OR5AL1P0C617 328 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 GCSHP23434 173 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
SRSF1-208ENST00000584773 SLC51BQ86UW2 128 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 NIT1Q86X76 327 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 NEXN-AS1Q8NBZ9 246 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
SRSF1-208ENST00000584773 BOLA1Q9Y3E2 137 aa11.97□□□□□ -0.49
SRSF1-208ENST00000584773 TRBV20OR9-2A0A075B6H5 130 aa11.96□□□□□ -0.49
SRSF1-208ENST00000584773 TRBV7-3A0A075B6L6 115 aa11.96□□□□□ -0.49
SRSF1-208ENST00000584773 TRBV10-1A0A0K0K1A3 114 aa11.96□□□□□ -0.49
SRSF1-208ENST00000584773 RAB4BP61018 213 aa11.96□□□□□ -0.49
SRSF1-208ENST00000584773 MEF2BQ02080 365 aaPredicted RBP11.96□□□□□ -0.49
SRSF1-208ENST00000584773 TPPP3Q9BW30 176 aa11.96□□□□□ -0.49
SRSF1-208ENST00000584773 C19orf71A6NCJ1 209 aa11.95□□□□□ -0.5
SRSF1-208ENST00000584773 BCL2P10415 239 aa11.95□□□□□ -0.5
SRSF1-208ENST00000584773 C9orf62Q8N4C0 152 aa11.95□□□□□ -0.5
SRSF1-208ENST00000584773 KLK12Q9UKR0 248 aa11.95□□□□□ -0.5
SRSF1-208ENST00000584773 KIF25-AS1Q9Y6Z4 181 aa11.95□□□□□ -0.5
SRSF1-208ENST00000584773 TEX46H3BTG2 121 aa11.94□□□□□ -0.5
SRSF1-208ENST00000584773 GNG4P50150 75 aa11.94□□□□□ -0.5
SRSF1-208ENST00000584773 OR2D3Q8NGH3 330 aa11.94□□□□□ -0.5
SRSF1-208ENST00000584773 OR10G8Q8NGN5 311 aa11.94□□□□□ -0.5
SRSF1-208ENST00000584773 MED9Q9NWA0 146 aa11.94□□□□□ -0.5
SRSF1-208ENST00000584773 TRAV8-3A0A0A6YYJ7 113 aa11.93□□□□□ -0.5
SRSF1-208ENST00000584773 F5H697 171 aa11.93□□□□□ -0.5
SRSF1-208ENST00000584773 IGLC6P0CF74 106 aa11.93□□□□□ -0.5
SRSF1-208ENST00000584773 AKAP14Q86UN6 197 aa11.93□□□□□ -0.5
SRSF1-208ENST00000584773 TM2D2Q9BX73 214 aa11.93□□□□□ -0.5
SRSF1-208ENST00000584773 URGCP-MRPS24S4R325 110 aa11.93□□□□□ -0.5
SRSF1-208ENST00000584773 PDE6DO43924 150 aa11.92□□□□□ -0.5
SRSF1-208ENST00000584773 IFNA1P01562 189 aa11.92□□□□□ -0.5
SRSF1-208ENST00000584773 FER1L6-AS1Q8NA97 138 aa11.92□□□□□ -0.5
SRSF1-208ENST00000584773 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
SRSF1-208ENST00000584773 DAZAP1Q96EP5 407 aaKnown RBP11.92□□□□□ -0.5
SRSF1-208ENST00000584773 VPS13BQ7Z7G8 4022 aa11.92□□□□□ -0.5
SRSF1-208ENST00000584773 NTN5Q8WTR8 489 aaPredicted RBP11.91□□□□□ -0.5
SRSF1-208ENST00000584773 UBE2WQ96B02 151 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms