RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 NTF3P20783 257 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 TDRG1Q3Y452 100 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 PRR9Q5T870 116 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 SYT8Q8NBV8 401 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 CSNK1G2-AS1Q8NCQ2 148 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 OR11H2Q8NH07 326 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 AP1S3Q96PC3 154 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 PCLOQ9Y6V0 5065 aa9.78□□□□□ -0.84
CSNK1D-220ENST00000581737 GFI1BQ5VTD9 330 aa9.77□□□□□ -0.85
CSNK1D-220ENST00000581737 LINC00518Q8N0U6 118 aa9.77□□□□□ -0.85
CSNK1D-220ENST00000581737 TMEM256Q8N2U0 113 aa9.77□□□□□ -0.85
CSNK1D-220ENST00000581737 TMEM208Q9BTX3 173 aa9.77□□□□□ -0.85
CSNK1D-220ENST00000581737 IGHV1OR15-1A0A075B7D0 117 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 TRAV12-3A0A0B4J271 114 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 PPP1R17O96001 155 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 SMIM17P0DL12 118 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 MIFP14174 115 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 CKS2P33552 79 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 MUC21Q5SSG8 566 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 RNASEKQ6P5S7 137 aaKnown RBP9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 ZNF705AQ6ZN79 300 aaPredicted RBP9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 C12orf57Q99622 126 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 C11orf21Q9P2W6 132 aa9.76□□□□□ -0.85
CSNK1D-220ENST00000581737 TRAV12-2A0A075B6T6 113 aa9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 SMIM9A6NGZ8 99 aa9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 CRXO43186 299 aaPredicted RBP9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 ZNF324O75467 553 aaPredicted RBP9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 AMTP48728 403 aa9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 MRAP2Q96G30 205 aa9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
CSNK1D-220ENST00000581737 IGHV3OR16-12A0A075B7B8 117 aa9.74□□□□□ -0.85
CSNK1D-220ENST00000581737 OR10AG1Q8NH19 301 aa9.74□□□□□ -0.85
CSNK1D-220ENST00000581737 C11orf68Q9H3H3 251 aaKnown RBP9.74□□□□□ -0.85
CSNK1D-220ENST00000581737 MAP1LC3AQ9H492 121 aa9.74□□□□□ -0.85
CSNK1D-220ENST00000581737 DPH3P1Q9H4G8 78 aa9.74□□□□□ -0.85
CSNK1D-220ENST00000581737 TIMM8BQ9Y5J9 83 aaPredicted RBP9.74□□□□□ -0.85
CSNK1D-220ENST00000581737 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 RYR1P21817 5038 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 D6R8Y8 96 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 S100A12P80511 92 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 IQCJQ1A5X6 159 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 MRPL51Q4U2R6 128 aaKnown RBP9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 C1orf158Q8N1D5 194 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 PRSS3P2Q8NHM4 247 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 LINC00467Q9BRT7 94 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 SCRT2Q9NQ03 307 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 X6R8D5 127 aa9.73□□□□□ -0.85
CSNK1D-220ENST00000581737 CBY3A6NI87 242 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 IFITM10A6NMD0 228 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 M0R381 172 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 NXPH4O95158 308 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 LINC00614P0C842 121 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 SSTP61278 116 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 RRN3P1Q2M238 152 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 Q8NAQ8 132 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 LINC01587Q99440 93 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 NXT2Q9NPJ8 142 aaKnown RBP9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 AP5S1Q9NUS5 200 aa9.72□□□□□ -0.85
CSNK1D-220ENST00000581737 VPS13DQ5THJ4 4388 aa9.71□□□□□ -0.85
CSNK1D-220ENST00000581737 IGHV4-28A0A0C4DH34 117 aa9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 MUC21A0A0G2JKD1 596 aa9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 A0A0J9YWU9 116 aa9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 MUC21A0A140T8X8 626 aa9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 JOSD1Q15040 202 aaPredicted RBP9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 NIT1Q86X76 327 aa9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 TP53TG3Q9ULZ0 132 aa9.71□□□□□ -0.86
CSNK1D-220ENST00000581737 RBMY1A1P0DJD3 496 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-220ENST00000581737 RBMY1CP0DJD4 496 aa9.7□□□□□ -0.86
CSNK1D-220ENST00000581737 KIR3DS1Q14943 382 aa9.7□□□□□ -0.86
CSNK1D-220ENST00000581737 RBMY1FQ15415 496 aaKnown RBP9.7□□□□□ -0.86
CSNK1D-220ENST00000581737 IL17DQ8TAD2 202 aa9.7□□□□□ -0.86
CSNK1D-220ENST00000581737 GSN-AS1Q9NRJ2 163 aa9.7□□□□□ -0.86
CSNK1D-220ENST00000581737 IGHV3-16A0A0C4DH30 117 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 TEX48A0A1B0GUV7 120 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 C20orf202A1L168 122 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 GNRH2O43555 120 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 RNASE3P12724 160 aaKnown RBP9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 PIK3CD-AS1Q5SR53 167 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 C9orf85Q96MD7 179 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 SPXQ9BT56 116 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 NDUFAF3Q9BU61 184 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
CSNK1D-220ENST00000581737 EVI2AP22794 236 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 LINC00310P59036 64 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 C16orf74Q96GX8 76 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 NIT2Q9NQR4 276 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 MSRB1Q9NZV6 116 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 KIAA1109Q2LD37 5005 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 HECTD4Q9Y4D8 3996 aa9.68□□□□□ -0.86
CSNK1D-220ENST00000581737 K7EMI3 77 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 TNFRSF6BO95407 300 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 SCGB1D1O95968 90 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 MGPP08493 103 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 HTN1P15515 57 aa9.67□□□□□ -0.86
CSNK1D-220ENST00000581737 ZNF575Q86XF7 245 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms