RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 SMLR1H3BR10 107 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 PAGE4O60829 102 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 TOR2AQ5JU69 321 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 ZFP82Q8N141 532 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.18
SSH2-208ENST00000579040 MBD3L1Q8WWY6 194 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 SFRP2Q96HF1 295 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 ABCA13Q86UQ4 5058 aa7.71□□□□□ -1.18
SSH2-208ENST00000579040 TRAV8-3A0A0A6YYJ7 113 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 CXCL1P09341 107 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 FAM74A4Q5TZK3 123 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 Q8N814 137 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 FAM213BQ8TBF2 198 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 SFT2D1Q8WV19 159 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 TMEM70Q9BUB7 260 aa7.7□□□□□ -1.18
SSH2-208ENST00000579040 TRBV10-1A0A0K0K1A3 114 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 KANTRA0A1W2PQU2 76 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 M0R381 172 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 BCL2L11O43521 198 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 PFDN1O60925 122 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 EIF5AP63241 154 aaKnown RBP7.69□□□□□ -1.18
SSH2-208ENST00000579040 FRZBQ92765 325 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 ZNF471Q9BX82 626 aaPredicted RBP7.69□□□□□ -1.18
SSH2-208ENST00000579040 Q9UF83 564 aa7.69□□□□□ -1.18
SSH2-208ENST00000579040 APOBP04114 4563 aaKnown RBP7.69□□□□□ -1.18
SSH2-208ENST00000579040 A0A087WWL8 130 aa7.68□□□□□ -1.18
SSH2-208ENST00000579040 TMSB15BA0A087X1C1 80 aa7.68□□□□□ -1.18
SSH2-208ENST00000579040 CHCHD7Q9BUK0 85 aa7.68□□□□□ -1.18
SSH2-208ENST00000579040 COX11Q9Y6N1 276 aa7.68□□□□□ -1.18
SSH2-208ENST00000579040 URGCP-MRPS24S4R325 110 aa7.68□□□□□ -1.18
SSH2-208ENST00000579040 DNAH5Q8TE73 4624 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 SCO2A0A1W2PP80 73 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 C1QBP02746 253 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 H2AFB1P0C5Y9 115 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 RPL36AP83881 106 aaKnown RBP7.67□□□□□ -1.18
SSH2-208ENST00000579040 Q5VSD8 79 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 DAZ4Q86SG3 579 aaKnown RBP7.67□□□□□ -1.18
SSH2-208ENST00000579040 NIT1Q86X76 327 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 Q8N3U1 123 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 RPL36ALQ969Q0 106 aaKnown RBP7.67□□□□□ -1.18
SSH2-208ENST00000579040 RMI2Q96E14 147 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 MLST8Q9BVC4 326 aa7.67□□□□□ -1.18
SSH2-208ENST00000579040 DAZ3Q9NR90 486 aaKnown RBP7.67□□□□□ -1.18
SSH2-208ENST00000579040 TRBV7-3A0A075B6L6 115 aa7.66□□□□□ -1.18
SSH2-208ENST00000579040 A0A1B0GV50 99 aa7.66□□□□□ -1.18
SSH2-208ENST00000579040 RAB4BP61018 213 aa7.66□□□□□ -1.18
SSH2-208ENST00000579040 BAGE2Q86Y30 109 aa7.66□□□□□ -1.18
SSH2-208ENST00000579040 OR10G8Q8NGN5 311 aa7.66□□□□□ -1.18
SSH2-208ENST00000579040 SNAI2O43623 268 aa7.65□□□□□ -1.18
SSH2-208ENST00000579040 OR5AL1P0C617 328 aa7.65□□□□□ -1.18
SSH2-208ENST00000579040 UBE2D3P61077 147 aa7.65□□□□□ -1.18
SSH2-208ENST00000579040 UBE2D2P62837 147 aa7.65□□□□□ -1.18
SSH2-208ENST00000579040 ELOBQ15370 118 aa7.65□□□□□ -1.18
SSH2-208ENST00000579040 SSBP4Q9BWG4 385 aaPredicted RBP7.65□□□□□ -1.18
SSH2-208ENST00000579040 MANBALQ9NQG1 85 aa7.65□□□□□ -1.18
SSH2-208ENST00000579040 A0A087WX48 190 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 TRAV1-1A0A0B4J248 108 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 INAFM2P0DMQ5 153 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 RAB5CP51148 216 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 RPL19P84098 196 aaKnown RBP7.64□□□□□ -1.19
SSH2-208ENST00000579040 ZNF56Q15929 161 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 PRR27Q6MZM9 219 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 KCNIP4Q6PIL6 250 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 TMUB2Q71RG4 321 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 OR10AG1Q8NH19 301 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 C11orf52Q96A22 123 aa7.64□□□□□ -1.19
SSH2-208ENST00000579040 DMBT1Q9UGM3 2413 aaPredicted RBP7.63□□□□□ -1.19
SSH2-208ENST00000579040 FAM229AH3BQW9 127 aa7.63□□□□□ -1.19
SSH2-208ENST00000579040 RPL35P42766 123 aaKnown RBP7.63□□□□□ -1.19
SSH2-208ENST00000579040 WFDC2Q14508 124 aa7.63□□□□□ -1.19
SSH2-208ENST00000579040 SPANXN1Q5VSR9 72 aa7.63□□□□□ -1.19
SSH2-208ENST00000579040 EIF5AL1Q6IS14 154 aaKnown RBP7.63□□□□□ -1.19
SSH2-208ENST00000579040 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.63□□□□□ -1.19
SSH2-208ENST00000579040 KLK12Q9UKR0 248 aa7.63□□□□□ -1.19
SSH2-208ENST00000579040 TEX46H3BTG2 121 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 SMR3BP02814 79 aaPredicted RBP7.62□□□□□ -1.19
SSH2-208ENST00000579040 PKIAP61925 76 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 Q0VG73 95 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 ATRAIDQ6UW56 229 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 Q6ZSA8 131 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 Q8N976 141 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 NEXN-AS1Q8NBZ9 246 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 GNG13Q9P2W3 67 aa7.62□□□□□ -1.19
SSH2-208ENST00000579040 FLG2Q5D862 2391 aaPredicted RBP7.61□□□□□ -1.19
SSH2-208ENST00000579040 IGKV2D-24A0A075B6R9 120 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 LECT2O14960 151 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 TMEM97Q5BJF2 176 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 BAALCQ8WXS3 180 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 SMIM12Q96EX1 92 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 AP1S3Q96PC3 154 aa7.61□□□□□ -1.19
SSH2-208ENST00000579040 RBFOX3A6NFN3 312 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 F5H697 171 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 SMIM17P0DL12 118 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 RPS20P60866 119 aaKnown RBP7.6□□□□□ -1.19
SSH2-208ENST00000579040 CCL20P78556 96 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 HAMPP81172 84 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 CENPWQ5EE01 88 aa7.6□□□□□ -1.19
SSH2-208ENST00000579040 DERL1Q9BUN8 251 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms