RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 NTF3P20783 257 aa10.18□□□□□ -0.78
NPLOC4-218ENST00000574964 CRYBA4P53673 196 aa10.18□□□□□ -0.78
NPLOC4-218ENST00000574964 RNF212Q495C1 297 aa10.18□□□□□ -0.78
NPLOC4-218ENST00000574964 ZFP2Q6ZN57 461 aa10.18□□□□□ -0.78
NPLOC4-218ENST00000574964 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
NPLOC4-218ENST00000574964 FOXA3P55318 350 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 NDUFA5Q16718 116 aa10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 SMIM15Q7Z3B0 74 aa10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 C14orf178Q8N769 122 aaPredicted RBP10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 MSRB1Q9NZV6 116 aa10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 NAT8BQ9UHF3 227 aa10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 APLNQ9ULZ1 77 aa10.17□□□□□ -0.78
NPLOC4-218ENST00000574964 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
NPLOC4-218ENST00000574964 F5H697 171 aa10.16□□□□□ -0.78
NPLOC4-218ENST00000574964 CRYGDP07320 174 aa10.16□□□□□ -0.78
NPLOC4-218ENST00000574964 GATA1P15976 413 aaPredicted RBP10.16□□□□□ -0.78
NPLOC4-218ENST00000574964 ZNF56Q15929 161 aa10.16□□□□□ -0.78
NPLOC4-218ENST00000574964 PRADC1Q9BSG0 188 aa10.16□□□□□ -0.78
NPLOC4-218ENST00000574964 H3BNG1 76 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 MGPP08493 103 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 GYPEP15421 78 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 RIGQ13278 110 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 RHOHQ15669 191 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 C10orf91Q5T1B1 145 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 SLC7A5P1Q8MH63 180 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 NUP35Q8NFH5 326 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 VSIG2Q96IQ7 327 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 CNFNQ9BYD5 112 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 CARHSP1Q9Y2V2 147 aaKnown RBP10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 ICOSQ9Y6W8 199 aa10.15□□□□□ -0.78
NPLOC4-218ENST00000574964 TRBV6-4A0A1B0GX49 114 aa10.14□□□□□ -0.79
NPLOC4-218ENST00000574964 SMIM27A0A1W2PRY6 76 aa10.14□□□□□ -0.79
NPLOC4-218ENST00000574964 APOC3P02656 99 aa10.14□□□□□ -0.79
NPLOC4-218ENST00000574964 MRPL23Q16540 153 aaKnown RBP10.14□□□□□ -0.79
NPLOC4-218ENST00000574964 SLC25A29Q8N8R3 303 aa10.14□□□□□ -0.79
NPLOC4-218ENST00000574964 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
NPLOC4-218ENST00000574964 K7EQD1 137 aa10.13□□□□□ -0.79
NPLOC4-218ENST00000574964 EVI2AP22794 236 aa10.13□□□□□ -0.79
NPLOC4-218ENST00000574964 SRIP30626 198 aa10.13□□□□□ -0.79
NPLOC4-218ENST00000574964 UFSP1Q6NVU6 142 aa10.13□□□□□ -0.79
NPLOC4-218ENST00000574964 UBE2DNLQ8IWF7 75 aa10.13□□□□□ -0.79
NPLOC4-218ENST00000574964 CTDSP1Q9GZU7 261 aa10.13□□□□□ -0.79
NPLOC4-218ENST00000574964 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
NPLOC4-218ENST00000574964 RAB4BP61018 213 aa10.12□□□□□ -0.79
NPLOC4-218ENST00000574964 Q6ZSN1 163 aa10.12□□□□□ -0.79
NPLOC4-218ENST00000574964 CLRN3Q8NCR9 226 aa10.12□□□□□ -0.79
NPLOC4-218ENST00000574964 A0A096LPF7 62 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 LOC100131303A0A0U1RQF7 123 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 C7orf77A4D0Y5 90 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 P0DMU3 169 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 FAM231AP0DMU4 169 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 FAM231CP0DMU5 169 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 SVBPQ8N300 66 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 RPS10P5Q9NQ39 176 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 KIF25-AS1Q9Y6Z4 181 aa10.11□□□□□ -0.79
NPLOC4-218ENST00000574964 CSMD3Q7Z407 3707 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 H7C1H1 209 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 SNAPINO95295 136 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 LY6G6CO95867 125 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 S100A8P05109 93 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 CAMPP49913 170 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 CCL18P55774 89 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 FAM3BP58499 235 aaPredicted RBP10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 RHEBQ15382 184 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 KCNIP4Q6PIL6 250 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 NEGR1Q7Z3B1 354 aa10.1□□□□□ -0.79
NPLOC4-218ENST00000574964 A0A1B0GW15 77 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 GAGE12JA6NER3 117 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 GAGE1Q13065 139 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 GAGE4Q13068 117 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 GAGE5Q13069 117 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 GAGE13Q4V321 117 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 SH2D6Q7Z4S9 175 aa10.09□□□□□ -0.79
NPLOC4-218ENST00000574964 STARD9Q9P2P6 4700 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 TRBV10-1A0A0K0K1A3 114 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 S100PP25815 95 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 LINC00315P59091 139 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 RPL36AP83881 106 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 LGALS9CQ6DKI2 356 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 SUMO4Q6EEV6 95 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 LINC00476Q8WZB0 136 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 RPL36ALQ969Q0 106 aaKnown RBP10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 IMMP2LQ96T52 175 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 TMEM191AQ9H0A3 160 aa10.08□□□□□ -0.8
NPLOC4-218ENST00000574964 A0A087WWC5 75 aa10.07□□□□□ -0.8
NPLOC4-218ENST00000574964 HBBP68871 147 aa10.07□□□□□ -0.8
NPLOC4-218ENST00000574964 ATP5L2Q7Z4Y8 100 aa10.07□□□□□ -0.8
NPLOC4-218ENST00000574964 BTF3L4Q96K17 158 aa10.07□□□□□ -0.8
NPLOC4-218ENST00000574964 ESRGQ1W209 222 aa10.06□□□□□ -0.8
NPLOC4-218ENST00000574964 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.06□□□□□ -0.8
NPLOC4-218ENST00000574964 ATP6V0E2Q8NHE4 81 aa10.06□□□□□ -0.8
NPLOC4-218ENST00000574964 TMEM242Q9NWH2 141 aa10.06□□□□□ -0.8
NPLOC4-218ENST00000574964 TNFRSF18Q9Y5U5 241 aa10.06□□□□□ -0.8
NPLOC4-218ENST00000574964 TRBV7-3A0A075B6L6 115 aa10.05□□□□□ -0.8
NPLOC4-218ENST00000574964 LCE6AA0A183 80 aa10.05□□□□□ -0.8
NPLOC4-218ENST00000574964 RASL11AQ6T310 242 aa10.05□□□□□ -0.8
NPLOC4-218ENST00000574964 AMN1Q8IY45 258 aa10.05□□□□□ -0.8
NPLOC4-218ENST00000574964 NEXN-AS1Q8NBZ9 246 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms