RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 SPATA3Q8NHX4 192 aa20.79■□□□□ 0.92
CTDNEP1-210ENST00000574322 IGLV2-18A0A075B6J9 118 aa20.78■□□□□ 0.92
CTDNEP1-210ENST00000574322 TRAV26-2A0A0B4J265 109 aa20.78■□□□□ 0.92
CTDNEP1-210ENST00000574322 Q8N8P6 123 aa20.78■□□□□ 0.92
CTDNEP1-210ENST00000574322 A0A096LNJ9 63 aa20.78■□□□□ 0.92
CTDNEP1-210ENST00000574322 INSL3P51460 131 aa20.78■□□□□ 0.92
CTDNEP1-210ENST00000574322 HSPB8Q9UJY1 196 aa20.78■□□□□ 0.92
CTDNEP1-210ENST00000574322 NUTF2P61970 127 aaKnown RBP20.77■□□□□ 0.92
CTDNEP1-210ENST00000574322 PTH2Q96A98 100 aa20.77■□□□□ 0.92
CTDNEP1-210ENST00000574322 PPP1R17O96001 155 aa20.76■□□□□ 0.91
CTDNEP1-210ENST00000574322 SMIM17P0DL12 118 aa20.76■□□□□ 0.91
CTDNEP1-210ENST00000574322 TMEM70Q9BUB7 260 aa20.76■□□□□ 0.91
CTDNEP1-210ENST00000574322 PKIAP61925 76 aa20.75■□□□□ 0.91
CTDNEP1-210ENST00000574322 PIK3CD-AS1Q5SR53 167 aa20.75■□□□□ 0.91
CTDNEP1-210ENST00000574322 RASL10AQ92737 203 aa20.75■□□□□ 0.91
CTDNEP1-210ENST00000574322 C20orf78Q9BR46 151 aa20.75■□□□□ 0.91
CTDNEP1-210ENST00000574322 ZNF664Q8N3J9 261 aa20.74■□□□□ 0.91
CTDNEP1-210ENST00000574322 LINC00173Q6ZV60 143 aa20.73■□□□□ 0.91
CTDNEP1-210ENST00000574322 LINC01587Q99440 93 aa20.73■□□□□ 0.91
CTDNEP1-210ENST00000574322 JPT2Q9H910 190 aa20.73■□□□□ 0.91
CTDNEP1-210ENST00000574322 ANK2Q01484 3957 aa20.73■□□□□ 0.91
CTDNEP1-210ENST00000574322 HBDP02042 147 aa20.73■□□□□ 0.91
CTDNEP1-210ENST00000574322 MGPP08493 103 aa20.73■□□□□ 0.91
CTDNEP1-210ENST00000574322 ZNF415Q09FC8 603 aa20.72■□□□□ 0.91
CTDNEP1-210ENST00000574322 XCL2Q9UBD3 114 aa20.72■□□□□ 0.91
CTDNEP1-210ENST00000574322 SYS1-DBNDD2H3BUS1 97 aa20.71■□□□□ 0.91
CTDNEP1-210ENST00000574322 CRYGDP07320 174 aa20.71■□□□□ 0.91
CTDNEP1-210ENST00000574322 ZNF876PQ49A33 203 aa20.71■□□□□ 0.91
CTDNEP1-210ENST00000574322 C9orf66Q5T8R8 295 aa20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 C1orf158Q8N1D5 194 aa20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 C11orf72Q8NBR9 251 aa20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 MAP1LC3CQ9BXW4 147 aa20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 SUMO2P61956 95 aaKnown RBP20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 SPATA12Q7Z6I5 190 aa20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 SMIM2Q9BVW6 85 aa20.7■□□□□ 0.9
CTDNEP1-210ENST00000574322 TSTD3H0UI37 97 aa20.69■□□□□ 0.9
CTDNEP1-210ENST00000574322 FCER1GP30273 86 aa20.69■□□□□ 0.9
CTDNEP1-210ENST00000574322 PET117Q6UWS5 81 aa20.69■□□□□ 0.9
CTDNEP1-210ENST00000574322 M0R2P5 195 aa20.68■□□□□ 0.9
CTDNEP1-210ENST00000574322 HTN1P15515 57 aa20.68■□□□□ 0.9
CTDNEP1-210ENST00000574322 RPL32P62910 135 aaKnown RBP20.68■□□□□ 0.9
CTDNEP1-210ENST00000574322 SPXQ9BT56 116 aa20.68■□□□□ 0.9
CTDNEP1-210ENST00000574322 A0A087WWL8 130 aa20.67■□□□□ 0.9
CTDNEP1-210ENST00000574322 K7EMI3 77 aa20.67■□□□□ 0.9
CTDNEP1-210ENST00000574322 GIG44P09565 113 aaPredicted RBP20.67■□□□□ 0.9
CTDNEP1-210ENST00000574322 SUMO4Q6EEV6 95 aa20.67■□□□□ 0.9
CTDNEP1-210ENST00000574322 RPL39LQ96EH5 51 aaKnown RBP20.67■□□□□ 0.9
CTDNEP1-210ENST00000574322 KIR2DL5BA0A0G2JN68 375 aa20.66■□□□□ 0.9
CTDNEP1-210ENST00000574322 KIR2DL5BA0A0G2JPC4 375 aa20.66■□□□□ 0.9
CTDNEP1-210ENST00000574322 MORN3Q6PF18 240 aaPredicted RBP20.66■□□□□ 0.9
CTDNEP1-210ENST00000574322 KIR2DL5AQ8N109 375 aa20.66■□□□□ 0.9
CTDNEP1-210ENST00000574322 WFDC10AQ9H1F0 79 aa20.66■□□□□ 0.9
CTDNEP1-210ENST00000574322 LAGE3Q14657 143 aa20.64■□□□□ 0.9
CTDNEP1-210ENST00000574322 NDUFAF3Q9BU61 184 aa20.64■□□□□ 0.9
CTDNEP1-210ENST00000574322 VAMP8Q9BV40 100 aa20.64■□□□□ 0.9
CTDNEP1-210ENST00000574322 PRO1933Q9H354 126 aa20.64■□□□□ 0.9
CTDNEP1-210ENST00000574322 PRM2P04554 102 aa20.64■□□□□ 0.89
CTDNEP1-210ENST00000574322 C1QTNF4Q9BXJ3 329 aa20.64■□□□□ 0.89
CTDNEP1-210ENST00000574322 TRBV6-5A0A0K0K1A5 114 aa20.63■□□□□ 0.89
CTDNEP1-210ENST00000574322 WFDC9Q8NEX5 89 aa20.63■□□□□ 0.89
CTDNEP1-210ENST00000574322 TMEM208Q9BTX3 173 aa20.63■□□□□ 0.89
CTDNEP1-210ENST00000574322 EDA2RQ9HAV5 297 aa20.63■□□□□ 0.89
CTDNEP1-210ENST00000574322 C20orf202A1L168 122 aa20.62■□□□□ 0.89
CTDNEP1-210ENST00000574322 A8MWV9 139 aa20.62■□□□□ 0.89
CTDNEP1-210ENST00000574322 MCRIP2Q9BUT9 160 aaKnown RBP20.62■□□□□ 0.89
CTDNEP1-210ENST00000574322 F5H697 171 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 FAM74A4Q5TZK3 123 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 IL17DQ8TAD2 202 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 TRRAPQ9Y4A5 3859 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 M0QY20 66 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 LINC01545Q5VT33 79 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 DNHD1Q96M86 4753 aa20.61■□□□□ 0.89
CTDNEP1-210ENST00000574322 LINC00587B1AMM8 73 aa20.6■□□□□ 0.89
CTDNEP1-210ENST00000574322 POLR2KP53803 58 aaKnown RBP20.6■□□□□ 0.89
CTDNEP1-210ENST00000574322 UFSP1Q6NVU6 142 aa20.6■□□□□ 0.89
CTDNEP1-210ENST00000574322 ST20Q9HBF5 79 aa20.6■□□□□ 0.89
CTDNEP1-210ENST00000574322 CSNK1G2-AS1Q8NCQ2 148 aa20.59■□□□□ 0.89
CTDNEP1-210ENST00000574322 GOLT1BQ9Y3E0 138 aa20.59■□□□□ 0.89
CTDNEP1-210ENST00000574322 AZU1P20160 251 aa20.58■□□□□ 0.89
CTDNEP1-210ENST00000574322 ORMDL2Q53FV1 153 aa20.58■□□□□ 0.89
CTDNEP1-210ENST00000574322 GTSCR1Q86UQ5 136 aa20.58■□□□□ 0.89
CTDNEP1-210ENST00000574322 RNASE8Q8TDE3 154 aaKnown RBP20.58■□□□□ 0.89
CTDNEP1-210ENST00000574322 IFI27L1Q96BM0 104 aa20.58■□□□□ 0.89
CTDNEP1-210ENST00000574322 TCAPO15273 167 aa20.58■□□□□ 0.88
CTDNEP1-210ENST00000574322 RPL35AP18077 110 aaKnown RBP20.58■□□□□ 0.88
CTDNEP1-210ENST00000574322 ZNF56Q15929 161 aa20.58■□□□□ 0.88
CTDNEP1-210ENST00000574322 CSTL1Q9H114 145 aa20.57■□□□□ 0.88
CTDNEP1-210ENST00000574322 PAM16Q9Y3D7 125 aa20.57■□□□□ 0.88
CTDNEP1-210ENST00000574322 VWFP04275 2813 aa20.57■□□□□ 0.88
CTDNEP1-210ENST00000574322 WIPF1O43516 503 aa20.56■□□□□ 0.88
CTDNEP1-210ENST00000574322 DDTP30046 118 aa20.56■□□□□ 0.88
CTDNEP1-210ENST00000574322 TMEM263Q8WUH6 116 aaKnown RBP20.56■□□□□ 0.88
CTDNEP1-210ENST00000574322 TRAV9-2A0A087WT02 112 aa20.56■□□□□ 0.88
CTDNEP1-210ENST00000574322 VCYO14598 125 aa20.54■□□□□ 0.88
CTDNEP1-210ENST00000574322 ZNF705AQ6ZN79 300 aaPredicted RBP20.54■□□□□ 0.88
CTDNEP1-210ENST00000574322 IGHV3OR16-12A0A075B7B8 117 aa20.53■□□□□ 0.88
CTDNEP1-210ENST00000574322 TRBV27A0A0K0K1C4 114 aa20.53■□□□□ 0.88
CTDNEP1-210ENST00000574322 LGALS9BQ3B8N2 356 aa20.53■□□□□ 0.88
CTDNEP1-210ENST00000574322 CFAP126Q5VTH2 177 aa20.53■□□□□ 0.88
CTDNEP1-210ENST00000574322 LGALS9CQ6DKI2 356 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms