RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	SCO1	O75880	301 aa		10.17	□□□□□ -0.78
ABR-223	ENST00000573895	NTF3	P20783	257 aa		10.17	□□□□□ -0.78
ABR-223	ENST00000573895	DAD1	P61803	113 aa		10.17	□□□□□ -0.78
ABR-223	ENST00000573895	LGALS9B	Q3B8N2	356 aa		10.17	□□□□□ -0.78
ABR-223	ENST00000573895	SPANXN1	Q5VSR9	72 aa		10.17	□□□□□ -0.78
ABR-223	ENST00000573895	YPEL4	Q96NS1	127 aa		10.17	□□□□□ -0.78
ABR-223	ENST00000573895	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.17	□□□□□ -0.78
ABR-223	ENST00000573895	NXPH4	O95158	308 aa		10.16	□□□□□ -0.78
ABR-223	ENST00000573895		P0DMU3	169 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	FAM231A	P0DMU4	169 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	FAM231C	P0DMU5	169 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	TWIST1	Q15672	202 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	ZNF876P	Q49A33	203 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	OR10AG1	Q8NH19	301 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	RASL10A	Q92737	203 aa		10.15	□□□□□ -0.78
ABR-223	ENST00000573895	EPPK1	P58107	5090 aa	Known RBP	10.15	□□□□□ -0.78
ABR-223	ENST00000573895	FRAS1	Q86XX4	4008 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	TGIF2-C20orf24	A0A0A6YYL0	155 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895		A0A1B0GXF2	115 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895		M0R381	172 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	SPINK4	O60575	86 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	TRGC1	P0CF51	173 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	HBB	P68871	147 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	DMRTA1	Q5VZB9	504 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	SMIM15	Q7Z3B0	74 aa		10.14	□□□□□ -0.79
ABR-223	ENST00000573895	NOP10	Q9NPE3	64 aa	Known RBP	10.14	□□□□□ -0.79
ABR-223	ENST00000573895	COLCA2	A8K830	154 aa		10.13	□□□□□ -0.79
ABR-223	ENST00000573895	MRPL54	Q6P161	138 aa	Known RBP	10.13	□□□□□ -0.79
ABR-223	ENST00000573895	MUC4	Q99102	2169 aa		10.13	□□□□□ -0.79
ABR-223	ENST00000573895	DNAH10	Q8IVF4	4471 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	MUC21	A0A0G2JKD1	596 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	MUC21	A0A140T8X8	626 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895		A8MWV9	139 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	SST	P61278	116 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	GATD1	Q8NB37	220 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	GNB1L	Q9BYB4	327 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	MSRB1	Q9NZV6	116 aa		10.12	□□□□□ -0.79
ABR-223	ENST00000573895	CIDEA	O60543	219 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	MT-ND6	P03923	174 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	ATP5G1	P05496	136 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	DEFB130B	P0DP73	79 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	DEFB130A	P0DP74	79 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	CAMP	P49913	170 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	LINC00612	Q8N6U2	182 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	POM121L12	Q8N7R1	296 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	C15orf53	Q8NAA6	179 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	AP1S3	Q96PC3	154 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	TMEM191A	Q9H0A3	160 aa		10.11	□□□□□ -0.79
ABR-223	ENST00000573895	TRGV1	A0A0A0MS02	117 aa		10.1	□□□□□ -0.79
ABR-223	ENST00000573895	HTN3	P15516	51 aa		10.1	□□□□□ -0.79
ABR-223	ENST00000573895	C18orf15	Q96N68	181 aa		10.1	□□□□□ -0.79
ABR-223	ENST00000573895	RS1	O15537	224 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	HLA-DQA1	P01909	254 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	SMIM17	P0DL12	118 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	RAB5A	P20339	215 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	RAB4B	P61018	213 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	TMEM136	Q6ZRR5	245 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	FRZB	Q92765	325 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	DPH3P1	Q9H4G8	78 aa		10.09	□□□□□ -0.79
ABR-223	ENST00000573895	MRPL16	Q9NX20	251 aa	Known RBP	10.09	□□□□□ -0.79
ABR-223	ENST00000573895	RHOD	O00212	210 aa		10.08	□□□□□ -0.8
ABR-223	ENST00000573895	EVI2A	P22794	236 aa		10.08	□□□□□ -0.8
ABR-223	ENST00000573895	ZFP2	Q6ZN57	461 aa		10.08	□□□□□ -0.8
ABR-223	ENST00000573895		Q6ZTI0	123 aa		10.08	□□□□□ -0.8
ABR-223	ENST00000573895	KIF25-AS1	Q9Y6Z4	181 aa		10.08	□□□□□ -0.8
ABR-223	ENST00000573895	NACA	E9PAV3	2078 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	TRGV2	A0A075B6R0	118 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	TRAV4	A0A0B4J268	109 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	GAGE12B	A1L429	117 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	GAGE7	O76087	117 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	CRYGD	P07320	174 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	GAGE12F	P0CL80	117 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	GAGE12G	P0CL81	117 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	GAGE12I	P0CL82	117 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	RPS10	P46783	165 aa	Known RBP	10.07	□□□□□ -0.8
ABR-223	ENST00000573895	CFAP126	Q5VTH2	177 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	FAM104B	Q5XKR9	115 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	C14orf178	Q8N769	122 aa	Predicted RBP	10.07	□□□□□ -0.8
ABR-223	ENST00000573895	OR4C5	Q8NGB2	326 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895	TRAPPC1	Q9Y5R8	145 aa		10.07	□□□□□ -0.8
ABR-223	ENST00000573895		F5H768	121 aa		10.06	□□□□□ -0.8
ABR-223	ENST00000573895	APCS	P02743	223 aa		10.06	□□□□□ -0.8
ABR-223	ENST00000573895	PPBP	P02775	128 aa		10.05	□□□□□ -0.8
ABR-223	ENST00000573895	RAB4A	P20338	218 aa		10.05	□□□□□ -0.8
ABR-223	ENST00000573895	LINC00315	P59091	139 aa		10.05	□□□□□ -0.8
ABR-223	ENST00000573895	MRPL18	Q9H0U6	180 aa	Known RBP	10.05	□□□□□ -0.8
ABR-223	ENST00000573895	JPT2	Q9H910	190 aa		10.05	□□□□□ -0.8
ABR-223	ENST00000573895		A0A087WWL8	130 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	FABP9	Q0Z7S8	132 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	UFSP1	Q6NVU6	142 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	UBE2DNL	Q8IWF7	75 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	AMN1	Q8IY45	258 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	MRAP2	Q96G30	205 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	RNF185	Q96GF1	192 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	SAMD10	Q9BYL1	202 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	BIRC6	Q9NR09	4857 aa		10.04	□□□□□ -0.8
ABR-223	ENST00000573895	DNAH2	Q9P225	4427 aa		10.03	□□□□□ -0.8
ABR-223	ENST00000573895		F5H697	171 aa		10.03	□□□□□ -0.8
ABR-223	ENST00000573895		H3BNG1	76 aa		10.03	□□□□□ -0.8
ABR-223	ENST00000573895	HECTD4	Q9Y4D8	3996 aa		10.02	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms