RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
CTDNEP1-207ENST00000572043 GTSF1LQ9H1H1 148 aa12.02□□□□□ -0.49
CTDNEP1-207ENST00000572043 TRAV1-1A0A0B4J248 108 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 MUC21A0A0G2JKD1 596 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 MUC21A0A140T8X8 626 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 TEX46H3BTG2 121 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 RHODO00212 210 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 ERVFC1-1P60608 527 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 SSTP61278 116 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 AKAP14Q86UN6 197 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 SFRP2Q96HF1 295 aa12.01□□□□□ -0.49
CTDNEP1-207ENST00000572043 SLC51BQ86UW2 128 aa12□□□□□ -0.49
CTDNEP1-207ENST00000572043 C10orf126Q8N4M7 172 aa12□□□□□ -0.49
CTDNEP1-207ENST00000572043 K7EP13 123 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 EREGO14944 169 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 CENPWQ5EE01 88 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 LINC01556Q5JQF7 62 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 OR10AG1Q8NH19 301 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 C11orf52Q96A22 123 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 KRTAP17-1Q9BYP8 105 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 Q9HAA7 133 aa11.99□□□□□ -0.49
CTDNEP1-207ENST00000572043 LINC00694P0DN24 101 aa11.98□□□□□ -0.49
CTDNEP1-207ENST00000572043 Q8N3U1 123 aa11.98□□□□□ -0.49
CTDNEP1-207ENST00000572043 A0A087WTM6 91 aa11.97□□□□□ -0.49
CTDNEP1-207ENST00000572043 RAB19A4D1S5 217 aa11.97□□□□□ -0.49
CTDNEP1-207ENST00000572043 C9orf62Q8N4C0 152 aa11.97□□□□□ -0.49
CTDNEP1-207ENST00000572043 IFNA1P01562 189 aa11.96□□□□□ -0.49
CTDNEP1-207ENST00000572043 MEF2BQ02080 365 aaPredicted RBP11.96□□□□□ -0.49
CTDNEP1-207ENST00000572043 SPANXN1Q5VSR9 72 aa11.96□□□□□ -0.49
CTDNEP1-207ENST00000572043 IBA57-AS1B1ANH7 110 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 PSCAO43653 123 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 GZMBP10144 247 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 BCL2P10415 239 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 ZNF56Q15929 161 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 TPPP3Q9BW30 176 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 MED9Q9NWA0 146 aa11.95□□□□□ -0.5
CTDNEP1-207ENST00000572043 SNAI2O43623 268 aa11.94□□□□□ -0.5
CTDNEP1-207ENST00000572043 CDK2AP2O75956 126 aa11.94□□□□□ -0.5
CTDNEP1-207ENST00000572043 IGLV2-8P01709 118 aa11.94□□□□□ -0.5
CTDNEP1-207ENST00000572043 CXCL1P09341 107 aa11.94□□□□□ -0.5
CTDNEP1-207ENST00000572043 GNG4P50150 75 aa11.94□□□□□ -0.5
CTDNEP1-207ENST00000572043 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
CTDNEP1-207ENST00000572043 PDE6DO43924 150 aa11.93□□□□□ -0.5
CTDNEP1-207ENST00000572043 OR5AL1P0C617 328 aa11.93□□□□□ -0.5
CTDNEP1-207ENST00000572043 VAX2Q9UIW0 290 aa11.93□□□□□ -0.5
CTDNEP1-207ENST00000572043 RBFOX3A6NFN3 312 aa11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 RPL36AP83881 106 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 ALKAL2Q6UX46 152 aa11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 DAZ4Q86SG3 579 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 OR2D3Q8NGH3 330 aa11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 RPL36ALQ969Q0 106 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 SSBP4Q9BWG4 385 aaPredicted RBP11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 DAZ3Q9NR90 486 aaKnown RBP11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 BOLA1Q9Y3E2 137 aa11.92□□□□□ -0.5
CTDNEP1-207ENST00000572043 A0A087WWC5 75 aa11.91□□□□□ -0.5
CTDNEP1-207ENST00000572043 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
CTDNEP1-207ENST00000572043 F5H697 171 aa11.91□□□□□ -0.5
CTDNEP1-207ENST00000572043 RAB4BP61018 213 aa11.91□□□□□ -0.5
CTDNEP1-207ENST00000572043 MAPKAPK5-AS1Q8N8E1 139 aa11.91□□□□□ -0.5
CTDNEP1-207ENST00000572043 KRTAP4-5Q9BYR2 181 aa11.91□□□□□ -0.5
CTDNEP1-207ENST00000572043 TRBV20OR9-2A0A075B6H5 130 aa11.9□□□□□ -0.5
CTDNEP1-207ENST00000572043 NKX2-5P52952 324 aaPredicted RBP11.9□□□□□ -0.5
CTDNEP1-207ENST00000572043 TRBV7-3A0A075B6L6 115 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 C19orf71A6NCJ1 209 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 P01737 135 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 SMIM17P0DL12 118 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 UBE2D3P61077 147 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 UBE2D2P62837 147 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 FER1L6-AS1Q8NA97 138 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 URGCP-MRPS24S4R325 110 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 LRP1BQ9NZR2 4599 aa11.89□□□□□ -0.51
CTDNEP1-207ENST00000572043 A0A1B0GVG6 124 aa11.88□□□□□ -0.51
CTDNEP1-207ENST00000572043 RPS20P60866 119 aaKnown RBP11.88□□□□□ -0.51
CTDNEP1-207ENST00000572043 NEXN-AS1Q8NBZ9 246 aa11.88□□□□□ -0.51
CTDNEP1-207ENST00000572043 AP1S3Q96PC3 154 aa11.88□□□□□ -0.51
CTDNEP1-207ENST00000572043 RYR1P21817 5038 aa11.88□□□□□ -0.51
CTDNEP1-207ENST00000572043 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
CTDNEP1-207ENST00000572043 MGPP08493 103 aa11.87□□□□□ -0.51
CTDNEP1-207ENST00000572043 LAGE3Q14657 143 aa11.87□□□□□ -0.51
CTDNEP1-207ENST00000572043 CDPF1Q6NVV7 123 aa11.87□□□□□ -0.51
CTDNEP1-207ENST00000572043 NIT1Q86X76 327 aa11.87□□□□□ -0.51
CTDNEP1-207ENST00000572043 SMIM12Q96EX1 92 aa11.87□□□□□ -0.51
CTDNEP1-207ENST00000572043 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
CTDNEP1-207ENST00000572043 TAGLN2P37802 199 aaKnown RBP11.86□□□□□ -0.51
CTDNEP1-207ENST00000572043 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
CTDNEP1-207ENST00000572043 OR10G8Q8NGN5 311 aa11.86□□□□□ -0.51
CTDNEP1-207ENST00000572043 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
CTDNEP1-207ENST00000572043 XKRY2A2RUG3 117 aa11.85□□□□□ -0.51
CTDNEP1-207ENST00000572043 BLOC1S1P78537 153 aa11.85□□□□□ -0.51
CTDNEP1-207ENST00000572043 DNAJC30Q96LL9 226 aa11.85□□□□□ -0.51
CTDNEP1-207ENST00000572043 TM2D2Q9BX73 214 aa11.85□□□□□ -0.51
CTDNEP1-207ENST00000572043 BIN3Q9NQY0 253 aa11.85□□□□□ -0.51
CTDNEP1-207ENST00000572043 KLK12Q9UKR0 248 aa11.85□□□□□ -0.51
CTDNEP1-207ENST00000572043 A0A087WX48 190 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 IGLV5-52A0A0A0MRZ9 124 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 TRAV8-3A0A0A6YYJ7 113 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 TMEM262E9PQX1 116 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 LECT2O14960 151 aa11.84□□□□□ -0.51
CTDNEP1-207ENST00000572043 CEBPGP53567 150 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms