RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GATD1Q8NB37 220 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 GNB1LQ9BYB4 327 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 DKK2Q9UBU2 259 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 CELA1Q9UNI1 258 aa11.01□□□□□ -0.65
HERPUD1-219ENST00000570273 A0A0J9YWU9 116 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 TEX48A0A1B0GUV7 120 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 MT-ND6P03923 174 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 MGPP08493 103 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 SPART-AS1P0CW21 52 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 FAM74A4Q5TZK3 123 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 DPH3P1Q9H4G8 78 aa11□□□□□ -0.65
HERPUD1-219ENST00000570273 RS1O15537 224 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 CFAP126Q5VTH2 177 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 AMN1Q8IY45 258 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 LINC00612Q8N6U2 182 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 OR4C5Q8NGB2 326 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 FRZBQ92765 325 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 SAMD10Q9BYL1 202 aa10.99□□□□□ -0.65
HERPUD1-219ENST00000570273 TGP01266 2768 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 TRAV4A0A0B4J268 109 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 IGHV3-53P01767 116 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 NHLRC4P0CG21 123 aaPredicted RBP10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 DAD1P61803 113 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 FAM104BQ5XKR9 115 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 MRPL18Q9H0U6 180 aaKnown RBP10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 TRAPPC1Q9Y5R8 145 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 COL7A1Q02388 2944 aa10.98□□□□□ -0.65
HERPUD1-219ENST00000570273 IGHV3-73A0A0B4J1V6 119 aa10.97□□□□□ -0.65
HERPUD1-219ENST00000570273 RHODO00212 210 aa10.97□□□□□ -0.65
HERPUD1-219ENST00000570273 APCSP02743 223 aa10.97□□□□□ -0.65
HERPUD1-219ENST00000570273 CRYGDP07320 174 aa10.97□□□□□ -0.65
HERPUD1-219ENST00000570273 ZNF56Q15929 161 aa10.97□□□□□ -0.65
HERPUD1-219ENST00000570273 KIF25-AS1Q9Y6Z4 181 aa10.97□□□□□ -0.65
HERPUD1-219ENST00000570273 FABP9Q0Z7S8 132 aa10.96□□□□□ -0.65
HERPUD1-219ENST00000570273 SLAQ13239 276 aa10.96□□□□□ -0.65
HERPUD1-219ENST00000570273 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.65
HERPUD1-219ENST00000570273 RNF185Q96GF1 192 aa10.96□□□□□ -0.65
HERPUD1-219ENST00000570273 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
HERPUD1-219ENST00000570273 F5H697 171 aa10.95□□□□□ -0.66
HERPUD1-219ENST00000570273 MRPL51Q4U2R6 128 aaKnown RBP10.95□□□□□ -0.66
HERPUD1-219ENST00000570273 TENM3Q9P273 2699 aa10.95□□□□□ -0.66
HERPUD1-219ENST00000570273 RAB4AP20338 218 aa10.94□□□□□ -0.66
HERPUD1-219ENST00000570273 LINC00315P59091 139 aa10.94□□□□□ -0.66
HERPUD1-219ENST00000570273 UFSP1Q6NVU6 142 aa10.94□□□□□ -0.66
HERPUD1-219ENST00000570273 ZFP2Q6ZN57 461 aa10.94□□□□□ -0.66
HERPUD1-219ENST00000570273 C18orf15Q96N68 181 aa10.94□□□□□ -0.66
HERPUD1-219ENST00000570273 DNAH9Q9NYC9 4486 aa10.94□□□□□ -0.66
HERPUD1-219ENST00000570273 NCR2O95944 276 aa10.93□□□□□ -0.66
HERPUD1-219ENST00000570273 TRGC2P03986 189 aa10.93□□□□□ -0.66
HERPUD1-219ENST00000570273 KIAA1644Q3SXP7 199 aa10.93□□□□□ -0.66
HERPUD1-219ENST00000570273 TRAV26-2A0A0B4J265 109 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 SMKR1H3BMG3 65 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 C12orf74Q32Q52 190 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 SUMO4Q6EEV6 95 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 C11orf45Q8TAV5 145 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 MRAP2Q96G30 205 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 TRGV4A0A0C4DH28 118 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 D6R8Y8 96 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 CIDEAO60543 219 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 ATP5G1P05496 136 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 CKS2P33552 79 aa10.92□□□□□ -0.66
HERPUD1-219ENST00000570273 HTN3P15516 51 aa10.91□□□□□ -0.66
HERPUD1-219ENST00000570273 NANOS2P60321 138 aaKnown RBP10.91□□□□□ -0.66
HERPUD1-219ENST00000570273 ORMDL3Q8N138 153 aa10.91□□□□□ -0.66
HERPUD1-219ENST00000570273 HUWE1Q7Z6Z7 4374 aaKnown RBP10.9□□□□□ -0.66
HERPUD1-219ENST00000570273 PPBPP02775 128 aa10.9□□□□□ -0.66
HERPUD1-219ENST00000570273 GATA1P15976 413 aaPredicted RBP10.9□□□□□ -0.66
HERPUD1-219ENST00000570273 Q6ZSN1 163 aa10.9□□□□□ -0.66
HERPUD1-219ENST00000570273 U3KQK5 164 aa10.9□□□□□ -0.66
HERPUD1-219ENST00000570273 C1orf196B1AJZ1 125 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 H7C1H1 209 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 GAS8-AS1O95177 125 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 SRIP30626 198 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 FHL2Q14192 279 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 Q6ZTC4 211 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 PRELID3AQ96N28 172 aa10.89□□□□□ -0.67
HERPUD1-219ENST00000570273 F5H768 121 aa10.88□□□□□ -0.67
HERPUD1-219ENST00000570273 K7EQD1 137 aa10.88□□□□□ -0.67
HERPUD1-219ENST00000570273 M0QY20 66 aa10.88□□□□□ -0.67
HERPUD1-219ENST00000570273 PHOX2AO14813 284 aa10.88□□□□□ -0.67
HERPUD1-219ENST00000570273 HOXA5P20719 270 aa10.88□□□□□ -0.67
HERPUD1-219ENST00000570273 ALKBH7Q9BT30 221 aaPredicted RBP10.88□□□□□ -0.67
HERPUD1-219ENST00000570273 NACAE9PAV3 2078 aa10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 P0DMU3 169 aa10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 FAM231AP0DMU4 169 aa10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 FAM231CP0DMU5 169 aa10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 OR10J3Q5JRS4 329 aa10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 RPL39LQ96EH5 51 aaKnown RBP10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 EDA2RQ9HAV5 297 aa10.87□□□□□ -0.67
HERPUD1-219ENST00000570273 NPYP01303 97 aa10.86□□□□□ -0.67
HERPUD1-219ENST00000570273 RHOHQ15669 191 aa10.86□□□□□ -0.67
HERPUD1-219ENST00000570273 SLC25A29Q8N8R3 303 aa10.86□□□□□ -0.67
HERPUD1-219ENST00000570273 NRACQ8N912 160 aa10.86□□□□□ -0.67
HERPUD1-219ENST00000570273 TRBV6-4A0A1B0GX49 114 aa10.85□□□□□ -0.67
HERPUD1-219ENST00000570273 TNFRSF6BO95407 300 aa10.85□□□□□ -0.67
HERPUD1-219ENST00000570273 PPP1R17O96001 155 aa10.85□□□□□ -0.67
HERPUD1-219ENST00000570273 PRADC1Q9BSG0 188 aa10.85□□□□□ -0.67
HERPUD1-219ENST00000570273 PRO0255Q9UI72 69 aa10.85□□□□□ -0.67
HERPUD1-219ENST00000570273 HHLA3Q9XRX5 114 aa10.85□□□□□ -0.67
HERPUD1-219ENST00000570273 LAMTOR2Q9Y2Q5 125 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms