RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 LINC01556Q5JQF7 62 aa11.24□□□□□ -0.61
EDC3-216ENST00000569561 LELP1Q5T871 98 aa11.24□□□□□ -0.61
EDC3-216ENST00000569561 GTSF1LQ9H1H1 148 aa11.24□□□□□ -0.61
EDC3-216ENST00000569561 C19orf71A6NCJ1 209 aa11.23□□□□□ -0.61
EDC3-216ENST00000569561 M0R381 172 aa11.23□□□□□ -0.61
EDC3-216ENST00000569561 PDE6DO43924 150 aa11.23□□□□□ -0.61
EDC3-216ENST00000569561 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
EDC3-216ENST00000569561 OR10AG1Q8NH19 301 aa11.23□□□□□ -0.61
EDC3-216ENST00000569561 ATP6V0E2Q8NHE4 81 aa11.23□□□□□ -0.61
EDC3-216ENST00000569561 A0A087WWL8 130 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 IGHV3-38A0A0C4DH36 116 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 GAGE12JA6NER3 117 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 EVI2AP22794 236 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 KRTAP10-2P60368 255 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 GAGE1Q13065 139 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 GAGE4Q13068 117 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 GAGE5Q13069 117 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 GAGE13Q4V321 117 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 PRR27Q6MZM9 219 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 LYPD6BQ8NI32 183 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 SMIM12Q96EX1 92 aa11.22□□□□□ -0.61
EDC3-216ENST00000569561 TRAV9-2A0A087WT02 112 aa11.21□□□□□ -0.61
EDC3-216ENST00000569561 RAB19A4D1S5 217 aa11.21□□□□□ -0.61
EDC3-216ENST00000569561 IFNA1P01562 189 aa11.21□□□□□ -0.61
EDC3-216ENST00000569561 SPATA12Q7Z6I5 190 aa11.21□□□□□ -0.61
EDC3-216ENST00000569561 MSRB1Q9NZV6 116 aa11.21□□□□□ -0.61
EDC3-216ENST00000569561 VAX2Q9UIW0 290 aa11.21□□□□□ -0.61
EDC3-216ENST00000569561 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
EDC3-216ENST00000569561 FAM74A4Q5TZK3 123 aa11.2□□□□□ -0.62
EDC3-216ENST00000569561 ALKAL2Q6UX46 152 aa11.2□□□□□ -0.62
EDC3-216ENST00000569561 NFE4Q86UQ8 179 aa11.2□□□□□ -0.62
EDC3-216ENST00000569561 C10orf126Q8N4M7 172 aa11.2□□□□□ -0.62
EDC3-216ENST00000569561 TRAV8-6A0A0B4J262 113 aa11.19□□□□□ -0.62
EDC3-216ENST00000569561 IGLC6P0CF74 106 aa11.19□□□□□ -0.62
EDC3-216ENST00000569561 TAGLN2P37802 199 aaKnown RBP11.19□□□□□ -0.62
EDC3-216ENST00000569561 NKX2-5P52952 324 aaPredicted RBP11.19□□□□□ -0.62
EDC3-216ENST00000569561 TRBV10-1A0A0K0K1A3 114 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 IBA57-AS1B1ANH7 110 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 GNG4P50150 75 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 OR10J3Q5JRS4 329 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 OR10G8Q8NGN5 311 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 MED9Q9NWA0 146 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 KIF25-AS1Q9Y6Z4 181 aa11.18□□□□□ -0.62
EDC3-216ENST00000569561 Q8N3U1 123 aa11.17□□□□□ -0.62
EDC3-216ENST00000569561 MUC21A0A0G2JKD1 596 aa11.16□□□□□ -0.62
EDC3-216ENST00000569561 MUC21A0A140T8X8 626 aa11.16□□□□□ -0.62
EDC3-216ENST00000569561 GZMBP10144 247 aa11.16□□□□□ -0.62
EDC3-216ENST00000569561 RAB4BP61018 213 aa11.16□□□□□ -0.62
EDC3-216ENST00000569561 BLOC1S1P78537 153 aa11.16□□□□□ -0.62
EDC3-216ENST00000569561 A0A087WTM6 91 aa11.15□□□□□ -0.62
EDC3-216ENST00000569561 RPS20P60866 119 aaKnown RBP11.15□□□□□ -0.62
EDC3-216ENST00000569561 UBE2D3P61077 147 aa11.15□□□□□ -0.62
EDC3-216ENST00000569561 UBE2D2P62837 147 aa11.15□□□□□ -0.62
EDC3-216ENST00000569561 OR2D3Q8NGH3 330 aa11.15□□□□□ -0.62
EDC3-216ENST00000569561 KRTAP17-1Q9BYP8 105 aa11.15□□□□□ -0.62
EDC3-216ENST00000569561 A0A087WWC5 75 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 RBFOX3A6NFN3 312 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 K7EN84 100 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 IGHV3-30P01768 117 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 IGHV3-33P01772 117 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 IGHV3-30-3P0DP02 117 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 IGHV3-30-5P0DP03 117 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 ERVFC1-1P60608 527 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 SPANXN1Q5VSR9 72 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 FER1L6-AS1Q8NA97 138 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 NEXN-AS1Q8NBZ9 246 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 PCLOQ9Y6V0 5065 aa11.14□□□□□ -0.63
EDC3-216ENST00000569561 TRBV7-3A0A075B6L6 115 aa11.13□□□□□ -0.63
EDC3-216ENST00000569561 TMEM250H0YL14 139 aa11.13□□□□□ -0.63
EDC3-216ENST00000569561 CDK2AP2O75956 126 aa11.13□□□□□ -0.63
EDC3-216ENST00000569561 LAGE3Q14657 143 aa11.13□□□□□ -0.63
EDC3-216ENST00000569561 DAZAP1Q96EP5 407 aaKnown RBP11.13□□□□□ -0.63
EDC3-216ENST00000569561 ABCA13Q86UQ4 5058 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 LRCOL1A6NCL2 159 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 P01737 135 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 RPL36AP83881 106 aaKnown RBP11.12□□□□□ -0.63
EDC3-216ENST00000569561 ZNF56Q15929 161 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 NIT1Q86X76 327 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 NUDT10Q8NFP7 164 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 RPL36ALQ969Q0 106 aaKnown RBP11.12□□□□□ -0.63
EDC3-216ENST00000569561 NUDT11Q96G61 164 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 AP1S3Q96PC3 154 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 BIN3Q9NQY0 253 aa11.12□□□□□ -0.63
EDC3-216ENST00000569561 NDUFS6O75380 124 aaKnown RBP11.11□□□□□ -0.63
EDC3-216ENST00000569561 CTRLP40313 264 aa11.11□□□□□ -0.63
EDC3-216ENST00000569561 OCC1Q8TAD7 63 aa11.11□□□□□ -0.63
EDC3-216ENST00000569561 CNFNQ9BYD5 112 aa11.11□□□□□ -0.63
EDC3-216ENST00000569561 DNAH8Q96JB1 4490 aa11.1□□□□□ -0.63
EDC3-216ENST00000569561 FUSP35637 526 aaKnown RBP eCLIP11.1□□□□□ -0.63
EDC3-216ENST00000569561 CACNG7P62955 275 aa11.1□□□□□ -0.63
EDC3-216ENST00000569561 XKRY2A2RUG3 117 aa11.09□□□□□ -0.63
EDC3-216ENST00000569561 F2Z2F3 143 aa11.09□□□□□ -0.63
EDC3-216ENST00000569561 SSTP61278 116 aa11.09□□□□□ -0.63
EDC3-216ENST00000569561 CDPF1Q6NVV7 123 aa11.09□□□□□ -0.63
EDC3-216ENST00000569561 DAZ4Q86SG3 579 aaKnown RBP11.09□□□□□ -0.63
EDC3-216ENST00000569561 TPPP3Q9BW30 176 aa11.09□□□□□ -0.63
EDC3-216ENST00000569561 RNASE7Q9H1E1 156 aaKnown RBP11.09□□□□□ -0.63
EDC3-216ENST00000569561 DAZ3Q9NR90 486 aaKnown RBP11.09□□□□□ -0.63
EDC3-216ENST00000569561 PGPEP1Q9NXJ5 209 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms