RNA–Protein interactions for RNA: ENST00000568186.5

TCF4-239, Transcript of transcription factor 4, humanhuman

TSL 2

Gene TCF4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-239ENST00000568186 C9orf116Q5BN46 136 aaPredicted RBP1.3□□□□□ -2.2
TCF4-239ENST00000568186 GDF5OSQ5U4N7 250 aa1.3□□□□□ -2.2
TCF4-239ENST00000568186 C5orf38Q86SI9 138 aa1.3□□□□□ -2.2
TCF4-239ENST00000568186 CPSF1Q10570 1443 aaKnown RBP1.3□□□□□ -2.2
TCF4-239ENST00000568186 ADGRL2O95490 1459 aa1.3□□□□□ -2.2
TCF4-239ENST00000568186 FREM3P0C091 2139 aa1.3□□□□□ -2.2
TCF4-239ENST00000568186 BRWD1Q9NSI6 2320 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 PRDM2Q13029 1718 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 ANKRD26Q9UPS8 1709 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 MCM3APO60318 1980 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 TRBV10-1A0A0K0K1A3 114 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 CBLN1P23435 193 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 IQCJQ1A5X6 159 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 SPATA45Q537H7 98 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 NDUFA11Q86Y39 141 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 SBSPONQ8IVN8 264 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 ODF3Q96PU9 254 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 HMCN1Q96RW7 5635 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 IFT140Q96RY7 1462 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 ARHGAP5Q13017 1502 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 ANK1P16157 1881 aa1.29□□□□□ -2.2
TCF4-239ENST00000568186 EML5Q05BV3 1969 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 RP1P56715 2156 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 FCGBPQ9Y6R7 5405 aaPredicted RBP1.28□□□□□ -2.2
TCF4-239ENST00000568186 PIGBOS1A0A0B4J2F0 54 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 UBE2L5PA0A1B0GUS4 154 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 RBAKDNA6NC62 111 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 ATP5EP56381 51 aaPredicted RBP1.28□□□□□ -2.2
TCF4-239ENST00000568186 UBA52P62987 128 aaKnown RBP1.28□□□□□ -2.2
TCF4-239ENST00000568186 UBE2L3P68036 154 aaKnown RBP1.28□□□□□ -2.2
TCF4-239ENST00000568186 RPL7L1Q6DKI1 246 aaKnown RBP1.28□□□□□ -2.2
TCF4-239ENST00000568186 C9orf62Q8N4C0 152 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 C10orf82Q8WW14 230 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 OBSCN-AS1Q96MR7 158 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 DPH3P1Q9H4G8 78 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 C10orf71Q711Q0 1435 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 CASKIN1Q8WXD9 1431 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 NSD3Q9BZ95 1437 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 TEX14Q8IWB6 1497 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 FYCO1Q9BQS8 1478 aa1.28□□□□□ -2.2
TCF4-239ENST00000568186 RBBP6Q7Z6E9 1792 aaKnown RBP1.28□□□□□ -2.2
TCF4-239ENST00000568186 PLXNA2O75051 1894 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 TRPM7Q96QT4 1865 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 LAMB1P07942 1786 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 IGKV2-40A0A087WW87 121 aaPredicted RBP1.27□□□□□ -2.21
TCF4-239ENST00000568186 TRBV10-3A0A0K0K1G6 114 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 SSSCA1O60232 199 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 IGKV2D-40P01614 121 aaPredicted RBP1.27□□□□□ -2.21
TCF4-239ENST00000568186 DCDP81605 110 aaKnown RBP1.27□□□□□ -2.21
TCF4-239ENST00000568186 COMMD6Q7Z4G1 85 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 SPTSSBQ8NFR3 76 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 IFI27L1Q96BM0 104 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 DPY30Q9C005 99 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 MRPL35Q9NZE8 188 aaKnown RBP1.27□□□□□ -2.21
TCF4-239ENST00000568186 LINC00312Q9Y6C7 94 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 V9GYS6 101 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 MPDZO75970 2070 aa1.27□□□□□ -2.21
TCF4-239ENST00000568186 MUC22E2RYF6 1773 aaPredicted RBP1.26□□□□□ -2.21
TCF4-239ENST00000568186 SHROOM2Q13796 1616 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 CDK12Q9NYV4 1490 aaPredicted RBP1.26□□□□□ -2.21
TCF4-239ENST00000568186 ABCC5O15440 1437 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 TRAV12-3A0A0B4J271 114 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 A6NIN4 97 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 HIGD1CA8MV81 97 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 H3BQ15 152 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 MT-ATP8P03928 68 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 CCKP06307 115 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 IL9P15248 144 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 SNCAP37840 140 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 RPL37AP61513 92 aaKnown RBP1.26□□□□□ -2.21
TCF4-239ENST00000568186 Q9H521 79 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 AP4S1Q9Y587 144 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 FBN3Q75N90 2809 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 CTTNBP2Q8WZ74 1663 aa1.26□□□□□ -2.21
TCF4-239ENST00000568186 BAZ1AQ9NRL2 1556 aaPredicted RBP1.25□□□□□ -2.21
TCF4-239ENST00000568186 MED14O60244 1454 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 GAPVD1Q14C86 1478 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 PPIP5K1Q6PFW1 1433 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 SCAPERQ9BY12 1400 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 CEP192Q8TEP8 1941 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 TRAV13-2A0A0B4J235 113 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 J3QKU1 62 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 LINC00032P0C843 101 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 FXYD4P59646 89 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 DEFB132Q7Z7B7 95 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 VAMP8Q9BV40 100 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 DOCK10Q96BY6 2186 aa1.25□□□□□ -2.21
TCF4-239ENST00000568186 MAGI1Q96QZ7 1491 aaPredicted RBP1.24□□□□□ -2.21
TCF4-239ENST00000568186 TOPAZ1Q8N9V7 1692 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 CITO14578 2027 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 HCG22E2RYF7 251 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 CCL8P80075 99 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 C4orf33Q8N1A6 199 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 DEFB119Q8N690 84 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 AMELYQ99218 206 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 FAIMQ9NVQ4 179 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 LINC00474Q9P2X8 69 aa1.24□□□□□ -2.21
TCF4-239ENST00000568186 BAZ2BQ9UIF8 2168 aaKnown RBP1.24□□□□□ -2.21
TCF4-239ENST00000568186 SIP14410 1827 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms