RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 LOC107984156A0A0G2JMH3 177 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 KLLNB2CW77 178 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 TSHBP01222 138 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 ARL17AQ8IVW1 177 aa10.66□□□□□ -0.7
CDH1-209ENST00000566510 UTP20O75691 2785 aaKnown RBP10.66□□□□□ -0.7
CDH1-209ENST00000566510 FLNCQ14315 2725 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 VCYO14598 125 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 C10orf105Q8TEF2 133 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 TSSC4Q9Y5U2 329 aaPredicted RBP10.65□□□□□ -0.7
CDH1-209ENST00000566510 TMEM238LA0A1B0GVL6 79 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 A6NJY4 79 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 J3QR89 54 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 HERVK_113P61574 105 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 ZNF56Q15929 161 aa10.65□□□□□ -0.7
CDH1-209ENST00000566510 MORN3Q6PF18 240 aaPredicted RBP10.65□□□□□ -0.7
CDH1-209ENST00000566510 IGLV1-40P01703 118 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 PMVKQ15126 192 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 DCANP1Q8TF63 244 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 IGLV4-69A0A075B6H9 119 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 TRBV7-9A0A0J9YWB2 115 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 A0A1B0GWB2 263 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 C10orf99Q6UWK7 81 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 MDFICQ9P1T7 246 aa10.64□□□□□ -0.71
CDH1-209ENST00000566510 USP9YO00507 2555 aaPredicted RBP10.63□□□□□ -0.71
CDH1-209ENST00000566510 IGHV4OR15-8A0A075B7B6 117 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 A0A087WW49 117 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 IGIPA6NJ69 53 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 LINC01619G3V211 115 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 MSMBP08118 114 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 POLR2KP53803 58 aaKnown RBP10.63□□□□□ -0.71
CDH1-209ENST00000566510 NXPH4O95158 308 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 SAMD13Q5VXD3 122 aa10.63□□□□□ -0.71
CDH1-209ENST00000566510 AVPP01185 164 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 COX6B1P14854 86 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 AZU1P20160 251 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 PSMB2P49721 201 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
CDH1-209ENST00000566510 INSL3P51460 131 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 SIGMAR1Q99720 223 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 OPRPNQ99935 248 aaPredicted RBP10.62□□□□□ -0.71
CDH1-209ENST00000566510 CENPEQ02224 2701 aa10.62□□□□□ -0.71
CDH1-209ENST00000566510 GAGE12HA6NDE8 117 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 SPINK13Q1W4C9 94 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 PAPPA-AS1Q5QFB9 102 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 POM121L12Q8N7R1 296 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 PKD1L2Q7Z442 2459 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 BRI3O95415 125 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 HTN1P15515 57 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 SNRPD3P62318 126 aaKnown RBP10.61□□□□□ -0.71
CDH1-209ENST00000566510 Q8N1Y9 231 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 ZANQ9Y493 2812 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 CFAP46Q8IYW2 2715 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 ZNRF2Q8NHG8 242 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 ZNF418Q8TF45 676 aaPredicted RBP10.61□□□□□ -0.71
CDH1-209ENST00000566510 TMEM141Q96I45 108 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 DUX5Q96PT3 197 aa10.61□□□□□ -0.71
CDH1-209ENST00000566510 K7EMT4 169 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 IGHV3-64A0A075B6Q5 118 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 A0A0J9YY99 117 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 TSPAN13O95857 204 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 IGHV4-59P01825 116 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 TSPEAR-AS2P59090 65 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 SYT8Q8NBV8 401 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 DLX4Q92988 240 aaPredicted RBP10.6□□□□□ -0.71
CDH1-209ENST00000566510 PRO0461Q9UI25 63 aa10.6□□□□□ -0.71
CDH1-209ENST00000566510 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
CDH1-209ENST00000566510 TRBV27A0A0K0K1C4 114 aa10.59□□□□□ -0.71
CDH1-209ENST00000566510 NDUFS8O00217 210 aa10.59□□□□□ -0.71
CDH1-209ENST00000566510 TGFAP01135 160 aa10.59□□□□□ -0.71
CDH1-209ENST00000566510 TIMM17AQ99595 171 aa10.59□□□□□ -0.71
CDH1-209ENST00000566510 USP9XQ93008 2570 aaPredicted RBP10.58□□□□□ -0.71
CDH1-209ENST00000566510 POLQO75417 2590 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 MYO18BQ8IUG5 2567 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 LGALS9O00182 355 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 LGALS3P17931 250 aaKnown RBP10.58□□□□□ -0.72
CDH1-209ENST00000566510 UBE2D1P51668 147 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 SYNJ2BPP57105 145 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
CDH1-209ENST00000566510 CFHR3Q02985 330 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 A0A0J9YX75 114 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 PSMB8P28062 276 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 ZNF876PQ49A33 203 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 NRGNQ92686 78 aa10.58□□□□□ -0.72
CDH1-209ENST00000566510 M0QY20 66 aa10.57□□□□□ -0.72
CDH1-209ENST00000566510 B4DSR2 109 aa10.57□□□□□ -0.72
CDH1-209ENST00000566510 J3QQQ9 107 aa10.57□□□□□ -0.72
CDH1-209ENST00000566510 DEFB112Q30KQ8 113 aa10.57□□□□□ -0.72
CDH1-209ENST00000566510 NDUFA11Q86Y39 141 aa10.57□□□□□ -0.72
CDH1-209ENST00000566510 IGHV1OR15-1A0A075B7D0 117 aa10.56□□□□□ -0.72
CDH1-209ENST00000566510 IGHV3-73A0A0B4J1V6 119 aa10.56□□□□□ -0.72
CDH1-209ENST00000566510 C9orf85Q96MD7 179 aa10.56□□□□□ -0.72
CDH1-209ENST00000566510 ANKRD17O75179 2603 aaKnown RBP10.56□□□□□ -0.72
CDH1-209ENST00000566510 SCGB1C2P0DMR2 95 aa10.56□□□□□ -0.72
CDH1-209ENST00000566510 PRORYQ9H606 182 aa10.56□□□□□ -0.72
CDH1-209ENST00000566510 MAPK1IP1LQ8NDC0 245 aa10.55□□□□□ -0.72
CDH1-209ENST00000566510 CFC1BP0CG36 223 aa10.55□□□□□ -0.72
CDH1-209ENST00000566510 CFC1P0CG37 223 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms