RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SFRP2Q96HF1 295 aa9.82□□□□□ -0.84
FANCA-220ENST00000566409 A0A087WWL8 130 aa9.81□□□□□ -0.84
FANCA-220ENST00000566409 EREGO14944 169 aa9.81□□□□□ -0.84
FANCA-220ENST00000566409 RPL19P84098 196 aaKnown RBP9.81□□□□□ -0.84
FANCA-220ENST00000566409 PHLDA3Q9Y5J5 127 aa9.81□□□□□ -0.84
FANCA-220ENST00000566409 FAT1Q14517 4588 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 LRCOL1A6NCL2 159 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 M0R381 172 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 PFDN1O60925 122 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 S100A9P06702 114 aaKnown RBP9.8□□□□□ -0.84
FANCA-220ENST00000566409 TPT1P13693 172 aaKnown RBP9.8□□□□□ -0.84
FANCA-220ENST00000566409 KRTAP10-1P60331 282 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 FAM74A4Q5TZK3 123 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 Q8N1X5 172 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 SYT8Q8NBV8 401 aa9.8□□□□□ -0.84
FANCA-220ENST00000566409 RHODO00212 210 aa9.79□□□□□ -0.84
FANCA-220ENST00000566409 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
FANCA-220ENST00000566409 CDPF1Q6NVV7 123 aa9.79□□□□□ -0.84
FANCA-220ENST00000566409 BAGE2Q86Y30 109 aa9.79□□□□□ -0.84
FANCA-220ENST00000566409 Q9HAA7 133 aa9.79□□□□□ -0.84
FANCA-220ENST00000566409 TRAV1-1A0A0B4J248 108 aa9.78□□□□□ -0.84
FANCA-220ENST00000566409 XGP55808 180 aa9.78□□□□□ -0.84
FANCA-220ENST00000566409 ZFP82Q8N141 532 aa9.78□□□□□ -0.84
FANCA-220ENST00000566409 DERL1Q9BUN8 251 aa9.78□□□□□ -0.84
FANCA-220ENST00000566409 DNAH8Q96JB1 4490 aa9.78□□□□□ -0.84
FANCA-220ENST00000566409 RPL35P42766 123 aaKnown RBP9.77□□□□□ -0.85
FANCA-220ENST00000566409 TCTE3Q8IZS6 198 aa9.77□□□□□ -0.85
FANCA-220ENST00000566409 OR10AG1Q8NH19 301 aa9.77□□□□□ -0.85
FANCA-220ENST00000566409 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
FANCA-220ENST00000566409 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
FANCA-220ENST00000566409 LAGE3Q14657 143 aa9.76□□□□□ -0.85
FANCA-220ENST00000566409 DAZ4Q86SG3 579 aaKnown RBP9.76□□□□□ -0.85
FANCA-220ENST00000566409 C11orf52Q96A22 123 aa9.76□□□□□ -0.85
FANCA-220ENST00000566409 DAZ3Q9NR90 486 aaKnown RBP9.76□□□□□ -0.85
FANCA-220ENST00000566409 VPS13BQ7Z7G8 4022 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 MUC21A0A0G2JKD1 596 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 MUC21A0A140T8X8 626 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 SNAI2O43623 268 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 PSCAO43653 123 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 IGLV2-8P01709 118 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 CXCL1P09341 107 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 SULT1A2P50226 295 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 RAB5CP51148 216 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 PRR27Q6MZM9 219 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 MANBALQ9NQG1 85 aa9.75□□□□□ -0.85
FANCA-220ENST00000566409 SRRM2Q9UQ35 2752 aaKnown RBP9.74□□□□□ -0.85
FANCA-220ENST00000566409 A0A087WWC5 75 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 OR5AL1P0C617 328 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 UBE2D3P61077 147 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 UBE2D2P62837 147 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 WFDC2Q14508 124 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 Q6ZNX1 250 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
FANCA-220ENST00000566409 TRBV10-1A0A0K0K1A3 114 aa9.73□□□□□ -0.85
FANCA-220ENST00000566409 GCSHP23434 173 aa9.73□□□□□ -0.85
FANCA-220ENST00000566409 NIT1Q86X76 327 aa9.73□□□□□ -0.85
FANCA-220ENST00000566409 Q8N814 137 aa9.73□□□□□ -0.85
FANCA-220ENST00000566409 OR10G8Q8NGN5 311 aa9.73□□□□□ -0.85
FANCA-220ENST00000566409 TRBV7-3A0A075B6L6 115 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 C1QBP02746 253 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 RAB4BP61018 213 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 SSTP61278 116 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 CENPWQ5EE01 88 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 EIF5AL1Q6IS14 154 aaKnown RBP9.72□□□□□ -0.85
FANCA-220ENST00000566409 KIF25-AS1Q9Y6Z4 181 aa9.72□□□□□ -0.85
FANCA-220ENST00000566409 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
FANCA-220ENST00000566409 GZMBP10144 247 aa9.71□□□□□ -0.86
FANCA-220ENST00000566409 MEF2BQ02080 365 aaPredicted RBP9.71□□□□□ -0.86
FANCA-220ENST00000566409 SLC51BQ86UW2 128 aa9.71□□□□□ -0.86
FANCA-220ENST00000566409 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.86
FANCA-220ENST00000566409 IGLV5-52A0A0A0MRZ9 124 aa9.7□□□□□ -0.86
FANCA-220ENST00000566409 TRAV8-3A0A0A6YYJ7 113 aa9.7□□□□□ -0.86
FANCA-220ENST00000566409 C19orf71A6NCJ1 209 aa9.7□□□□□ -0.86
FANCA-220ENST00000566409 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
FANCA-220ENST00000566409 ZNF56Q15929 161 aa9.7□□□□□ -0.86
FANCA-220ENST00000566409 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
FANCA-220ENST00000566409 NTN5Q8WTR8 489 aaPredicted RBP9.7□□□□□ -0.86
FANCA-220ENST00000566409 RPL36ALQ969Q0 106 aaKnown RBP9.7□□□□□ -0.86
FANCA-220ENST00000566409 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
FANCA-220ENST00000566409 RBFOX3A6NFN3 312 aa9.69□□□□□ -0.86
FANCA-220ENST00000566409 IGLC6P0CF74 106 aa9.69□□□□□ -0.86
FANCA-220ENST00000566409 KLK12Q9UKR0 248 aa9.69□□□□□ -0.86
FANCA-220ENST00000566409 TEX46H3BTG2 121 aa9.68□□□□□ -0.86
FANCA-220ENST00000566409 LECT2O14960 151 aa9.68□□□□□ -0.86
FANCA-220ENST00000566409 BCL2P10415 239 aa9.68□□□□□ -0.86
FANCA-220ENST00000566409 HAMPP81172 84 aa9.68□□□□□ -0.86
FANCA-220ENST00000566409 C9orf62Q8N4C0 152 aa9.68□□□□□ -0.86
FANCA-220ENST00000566409 TRBV6-8A0A0A6YYG3 113 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 PDE6DO43924 150 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 GNG4P50150 75 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 TOR2AQ5JU69 321 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 OR2D3Q8NGH3 330 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 MED9Q9NWA0 146 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 FAM30AQ9NZY2 134 aa9.67□□□□□ -0.86
FANCA-220ENST00000566409 EPM2AB3EWF7 344 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 F5H697 171 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 NTM-AS1Q6ZSK4 140 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
FANCA-220ENST00000566409 BAALCQ8WXS3 180 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms