RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 LINC00694P0DN24 101 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 MEF2BQ02080 365 aaPredicted RBP12.87□□□□□ -0.35
TRADD-203ENST00000563348 GAGE1Q13065 139 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 GAGE4Q13068 117 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 GAGE5Q13069 117 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 GAGE13Q4V321 117 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 PRR27Q6MZM9 219 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 SPATA12Q7Z6I5 190 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 C10orf126Q8N4M7 172 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
TRADD-203ENST00000563348 MSRB1Q9NZV6 116 aa12.87□□□□□ -0.35
TRADD-203ENST00000563348 DNAH5Q8TE73 4624 aa12.86□□□□□ -0.35
TRADD-203ENST00000563348 RYR1P21817 5038 aa12.86□□□□□ -0.35
TRADD-203ENST00000563348 A0A087WWL8 130 aa12.86□□□□□ -0.35
TRADD-203ENST00000563348 PDE6DO43924 150 aa12.86□□□□□ -0.35
TRADD-203ENST00000563348 LINC01556Q5JQF7 62 aa12.86□□□□□ -0.35
TRADD-203ENST00000563348 FAM74A4Q5TZK3 123 aa12.86□□□□□ -0.35
TRADD-203ENST00000563348 IGLV2-8P01709 118 aa12.85□□□□□ -0.35
TRADD-203ENST00000563348 BCL2P10415 239 aa12.85□□□□□ -0.35
TRADD-203ENST00000563348 CENPWQ5EE01 88 aa12.85□□□□□ -0.35
TRADD-203ENST00000563348 VAX2Q9UIW0 290 aa12.85□□□□□ -0.35
TRADD-203ENST00000563348 RAB19A4D1S5 217 aa12.84□□□□□ -0.35
TRADD-203ENST00000563348 SNAI2O43623 268 aa12.84□□□□□ -0.35
TRADD-203ENST00000563348 OR5AL1P0C617 328 aa12.84□□□□□ -0.35
TRADD-203ENST00000563348 TAGLN2P37802 199 aaKnown RBP12.84□□□□□ -0.35
TRADD-203ENST00000563348 OR10AG1Q8NH19 301 aa12.84□□□□□ -0.35
TRADD-203ENST00000563348 MED9Q9NWA0 146 aa12.84□□□□□ -0.35
TRADD-203ENST00000563348 KRTAP10-2P60368 255 aa12.83□□□□□ -0.36
TRADD-203ENST00000563348 SMIM12Q96EX1 92 aa12.83□□□□□ -0.36
TRADD-203ENST00000563348 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
TRADD-203ENST00000563348 GNG4P50150 75 aa12.82□□□□□ -0.36
TRADD-203ENST00000563348 DAZAP1Q96EP5 407 aaKnown RBP12.82□□□□□ -0.36
TRADD-203ENST00000563348 TRBV10-1A0A0K0K1A3 114 aa12.81□□□□□ -0.36
TRADD-203ENST00000563348 C19orf71A6NCJ1 209 aa12.81□□□□□ -0.36
TRADD-203ENST00000563348 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
TRADD-203ENST00000563348 A0A087WWC5 75 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 EREGO14944 169 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 BLOC1S1P78537 153 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 SPANXN1Q5VSR9 72 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
TRADD-203ENST00000563348 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 IGHV3-30P01768 117 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 IGHV3-33P01772 117 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 IGHV3-30-3P0DP02 117 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 IGHV3-30-5P0DP03 117 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 RPS20P60866 119 aaKnown RBP12.79□□□□□ -0.36
TRADD-203ENST00000563348 RAB4BP61018 213 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 OR2D3Q8NGH3 330 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 PGPEP1Q9NXJ5 209 aa12.79□□□□□ -0.36
TRADD-203ENST00000563348 A0A087WTM6 91 aa12.78□□□□□ -0.36
TRADD-203ENST00000563348 A0A1B0GVG6 124 aa12.78□□□□□ -0.36
TRADD-203ENST00000563348 RPL36AP83881 106 aaKnown RBP12.78□□□□□ -0.36
TRADD-203ENST00000563348 RPL36ALQ969Q0 106 aaKnown RBP12.78□□□□□ -0.36
TRADD-203ENST00000563348 BIN3Q9NQY0 253 aa12.78□□□□□ -0.36
TRADD-203ENST00000563348 HSPG2P98160 4391 aa12.78□□□□□ -0.36
TRADD-203ENST00000563348 TRBV7-3A0A075B6L6 115 aa12.77□□□□□ -0.37
TRADD-203ENST00000563348 IGLC6P0CF74 106 aa12.77□□□□□ -0.37
TRADD-203ENST00000563348 GZMBP10144 247 aa12.77□□□□□ -0.37
TRADD-203ENST00000563348 SSTP61278 116 aa12.77□□□□□ -0.37
TRADD-203ENST00000563348 OR10G8Q8NGN5 311 aa12.77□□□□□ -0.37
TRADD-203ENST00000563348 LYPD6BQ8NI32 183 aa12.77□□□□□ -0.37
TRADD-203ENST00000563348 APOBP04114 4563 aaKnown RBP12.77□□□□□ -0.37
TRADD-203ENST00000563348 CDK2AP2O75956 126 aa12.76□□□□□ -0.37
TRADD-203ENST00000563348 P01737 135 aa12.76□□□□□ -0.37
TRADD-203ENST00000563348 NKX2-5P52952 324 aaPredicted RBP12.76□□□□□ -0.37
TRADD-203ENST00000563348 UBE2D3P61077 147 aa12.76□□□□□ -0.37
TRADD-203ENST00000563348 UBE2D2P62837 147 aa12.76□□□□□ -0.37
TRADD-203ENST00000563348 FER1L6-AS1Q8NA97 138 aa12.76□□□□□ -0.37
TRADD-203ENST00000563348 KIF25-AS1Q9Y6Z4 181 aa12.76□□□□□ -0.37
TRADD-203ENST00000563348 XKRY2A2RUG3 117 aa12.75□□□□□ -0.37
TRADD-203ENST00000563348 RBFOX3A6NFN3 312 aa12.75□□□□□ -0.37
TRADD-203ENST00000563348 LAGE3Q14657 143 aa12.75□□□□□ -0.37
TRADD-203ENST00000563348 ZNF56Q15929 161 aa12.75□□□□□ -0.37
TRADD-203ENST00000563348 Q8N3U1 123 aa12.74□□□□□ -0.37
TRADD-203ENST00000563348 NUDT10Q8NFP7 164 aa12.74□□□□□ -0.37
TRADD-203ENST00000563348 NUDT11Q96G61 164 aa12.74□□□□□ -0.37
TRADD-203ENST00000563348 TPPP3Q9BW30 176 aa12.74□□□□□ -0.37
TRADD-203ENST00000563348 Q9HAA7 133 aa12.74□□□□□ -0.37
TRADD-203ENST00000563348 F2Z2F3 143 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 F5H697 171 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 PSCAO43653 123 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 SMIM17P0DL12 118 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 CACNG7P62955 275 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 NEXN-AS1Q8NBZ9 246 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 AP1S3Q96PC3 154 aa12.73□□□□□ -0.37
TRADD-203ENST00000563348 TMEM250H0YL14 139 aa12.72□□□□□ -0.37
TRADD-203ENST00000563348 CDPF1Q6NVV7 123 aa12.72□□□□□ -0.37
TRADD-203ENST00000563348 DAZ4Q86SG3 579 aaKnown RBP12.72□□□□□ -0.37
TRADD-203ENST00000563348 NIT1Q86X76 327 aa12.72□□□□□ -0.37
TRADD-203ENST00000563348 DAZ3Q9NR90 486 aaKnown RBP12.72□□□□□ -0.37
TRADD-203ENST00000563348 LRCOL1A6NCL2 159 aa12.71□□□□□ -0.37
TRADD-203ENST00000563348 FUSP35637 526 aaKnown RBP eCLIP12.71□□□□□ -0.37
TRADD-203ENST00000563348 TRAV8-3A0A0A6YYJ7 113 aa12.7□□□□□ -0.38
TRADD-203ENST00000563348 K7EN84 100 aa12.7□□□□□ -0.38
TRADD-203ENST00000563348 TOR2AQ5JU69 321 aa12.7□□□□□ -0.38
TRADD-203ENST00000563348 WDR73Q6P4I2 378 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms