RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 COX6A2Q02221 97 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 NDUFA5Q16718 116 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 KCNIP4Q6PIL6 250 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 GOLT1AQ6ZVE7 132 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 OR2G3Q8NGZ4 309 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 PRSS3P2Q8NHM4 247 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 NPCDR1Q9BY65 106 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 SLIRPQ9GZT3 109 aaKnown RBP4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 GSKIPQ9P0R6 139 aa4.73□□□□□ -1.65
HERPUD1-206ENST00000563343 A0A087WWL8 130 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 A0A1B0GVG6 124 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 IGSF23A1L1A6 192 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 PTTG1O95997 202 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 SULT1A1P50225 295 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 BCAP31P51572 246 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 DEFA1P59665 94 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 DEFA3P59666 94 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 RAB32Q13637 225 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 SPCS2Q15005 226 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 MAJINQ3KP22 176 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 LGALSLQ3ZCW2 172 aaPredicted RBP4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 CLPSL2Q6UWE3 100 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 ARL6IP6Q8N6S5 226 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 STPG4Q8N801 248 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 LYPD6BQ8NI32 183 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 HYLS1Q96M11 299 aa4.72□□□□□ -1.65
HERPUD1-206ENST00000563343 TRBV7-3A0A075B6L6 115 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 IGKV3D-20A0A0C4DH25 116 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 FAM231BA6NCW3 169 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 L7N2F9 121 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 OR7C2O60412 319 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 S100A11P31949 105 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 UBE2L3P68036 154 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 SPANXN2Q5MJ10 180 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 TOMM5Q8N4H5 51 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 TMEM252Q8N6L7 170 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 DEDD2Q8WXF8 326 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 SGK494Q96LW2 274 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 OTORQ9NRC9 128 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 LYRM2Q9NU23 88 aaPredicted RBP4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 PSORS1C2Q9UIG4 136 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 FLVCR2Q9UPI3 526 aa4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 LSM5Q9Y4Y9 91 aaKnown RBP4.71□□□□□ -1.66
HERPUD1-206ENST00000563343 IGLV10-54A0A075B6I4 117 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 A0A096LNI7 61 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 IGKV2-24A0A0C4DH68 120 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 TRBV10-1A0A0K0K1A3 114 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 RHODO00212 210 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 NDUFS6O75380 124 aaKnown RBP4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 GCGP01275 180 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 S100A5P33763 92 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 RBX1P62877 108 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 GNG5P63218 68 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 RPL36AP83881 106 aaKnown RBP4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 ATP6V1FQ16864 119 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 Q6ZRP5 223 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 NTM-AS1Q6ZSK4 140 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 LINC00269Q8N2A0 174 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 ZNF664Q8N3J9 261 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 PRR26Q8N8Z3 221 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 C15orf56Q8N910 161 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 OR10G8Q8NGN5 311 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 MITD1Q8WV92 249 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 RPL36ALQ969Q0 106 aaKnown RBP4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 CCDC32Q9BV29 185 aa4.7□□□□□ -1.66
HERPUD1-206ENST00000563343 NDUFB6O95139 128 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 S100A1P23297 94 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 AP3S2P59780 193 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 PRR4Q16378 134 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 FAM74A4Q5TZK3 123 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 CMTM2Q8TAZ6 248 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 THAP6Q8TBB0 222 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 NMES1Q9C002 83 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 IL36BQ9NZH7 164 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 OR5AC2Q9NZP5 309 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 V9GYH0 126 aa4.69□□□□□ -1.66
HERPUD1-206ENST00000563343 TRAV26-2A0A0B4J265 109 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 ATP6V1G1O75348 118 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 EIF3GO75821 320 aaKnown RBP eCLIP4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 UPK1BO75841 260 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 S100A10P60903 97 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 HBG1P69891 147 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 HBG2P69892 147 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 IL15RAQ13261 267 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 DNLZQ5SXM8 178 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 SFRP2Q96HF1 295 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 CHCHD5Q9BSY4 110 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 MBD2Q9UBB5 411 aa4.68□□□□□ -1.66
HERPUD1-206ENST00000563343 H3BVH4 76 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 S100A4P26447 101 aaKnown RBP4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 RPS10P46783 165 aaKnown RBP4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 PKIAP61925 76 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 REG3AQ06141 175 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 SMUG1Q53HV7 270 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 KHDC3LQ587J8 217 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 PRR27Q6MZM9 219 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 AKAP14Q86UN6 197 aa4.67□□□□□ -1.66
HERPUD1-206ENST00000563343 STX12Q86Y82 276 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms