RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 JPT2Q9H910 190 aa11.37□□□□□ -0.59
CDT1-202ENST00000562747 NXPH4O95158 308 aa11.36□□□□□ -0.59
CDT1-202ENST00000562747 RPS20P60866 119 aaKnown RBP11.36□□□□□ -0.59
CDT1-202ENST00000562747 SOHLH1Q5JUK2 328 aa11.36□□□□□ -0.59
CDT1-202ENST00000562747 C1orf134Q5TEV5 83 aa11.36□□□□□ -0.59
CDT1-202ENST00000562747 TEX261Q6UWH6 196 aa11.36□□□□□ -0.59
CDT1-202ENST00000562747 SAMD10Q9BYL1 202 aa11.36□□□□□ -0.59
CDT1-202ENST00000562747 A0A1W2PPQ1 181 aa11.35□□□□□ -0.59
CDT1-202ENST00000562747 SIVA1O15304 175 aa11.35□□□□□ -0.59
CDT1-202ENST00000562747 P01737 135 aa11.35□□□□□ -0.59
CDT1-202ENST00000562747 TOR2AQ5JU69 321 aa11.35□□□□□ -0.59
CDT1-202ENST00000562747 FAM210AQ96ND0 272 aa11.35□□□□□ -0.59
CDT1-202ENST00000562747 EIF5A2Q9GZV4 153 aaKnown RBP11.35□□□□□ -0.59
CDT1-202ENST00000562747 XKRY2A2RUG3 117 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 TIRAPP58753 221 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 TNP2Q05952 138 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 FAM74A4Q5TZK3 123 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 Q6ZSN1 163 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 OR2D3Q8NGH3 330 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 OR10AG1Q8NH19 301 aa11.34□□□□□ -0.59
CDT1-202ENST00000562747 CRYGDP07320 174 aa11.33□□□□□ -0.6
CDT1-202ENST00000562747 SPANXN1Q5VSR9 72 aa11.33□□□□□ -0.6
CDT1-202ENST00000562747 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
CDT1-202ENST00000562747 APOBP04114 4563 aaKnown RBP11.33□□□□□ -0.6
CDT1-202ENST00000562747 A0A087WWL8 130 aa11.32□□□□□ -0.6
CDT1-202ENST00000562747 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
CDT1-202ENST00000562747 BTF3P20290 206 aaKnown RBP11.32□□□□□ -0.6
CDT1-202ENST00000562747 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
CDT1-202ENST00000562747 K7EN84 100 aa11.31□□□□□ -0.6
CDT1-202ENST00000562747 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
CDT1-202ENST00000562747 NUDT10Q8NFP7 164 aa11.31□□□□□ -0.6
CDT1-202ENST00000562747 NUDT11Q96G61 164 aa11.31□□□□□ -0.6
CDT1-202ENST00000562747 KRTAP1-5Q9BYS1 174 aa11.31□□□□□ -0.6
CDT1-202ENST00000562747 LY96Q9Y6Y9 160 aa11.31□□□□□ -0.6
CDT1-202ENST00000562747 C16orf90A8MZG2 172 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 CDK2AP2O75956 126 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 LINC00694P0DN24 101 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 GZMBP10144 247 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 CEBPGP53567 150 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 C14orf178Q8N769 122 aaPredicted RBP11.3□□□□□ -0.6
CDT1-202ENST00000562747 MAPKAPK5-AS1Q8N8E1 139 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 ATP6V0E2Q8NHE4 81 aa11.3□□□□□ -0.6
CDT1-202ENST00000562747 MUC21A0A0G2JKD1 596 aa11.29□□□□□ -0.6
CDT1-202ENST00000562747 MUC21A0A140T8X8 626 aa11.29□□□□□ -0.6
CDT1-202ENST00000562747 F2Z2F3 143 aa11.29□□□□□ -0.6
CDT1-202ENST00000562747 K7EP13 123 aa11.29□□□□□ -0.6
CDT1-202ENST00000562747 SRP19P09132 144 aaKnown RBP11.29□□□□□ -0.6
CDT1-202ENST00000562747 GTSF1LQ9H1H1 148 aa11.29□□□□□ -0.6
CDT1-202ENST00000562747 RPP21Q9H633 154 aaKnown RBP11.29□□□□□ -0.6
CDT1-202ENST00000562747 DNAH5Q8TE73 4624 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 TRBV10-1A0A0K0K1A3 114 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 GAGE12JA6NER3 117 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 RAB4BP61018 213 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 CACNG7P62955 275 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 GAGE1Q13065 139 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 GAGE4Q13068 117 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 GAGE5Q13069 117 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 GAGE13Q4V321 117 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 WFDC10BQ8IUB3 73 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 AP1S3Q96PC3 154 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 SMIM7Q9BQ49 75 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 TPPP3Q9BW30 176 aa11.28□□□□□ -0.6
CDT1-202ENST00000562747 RNASE7Q9H1E1 156 aaKnown RBP11.28□□□□□ -0.6
CDT1-202ENST00000562747 TRAV9-2A0A087WT02 112 aa11.27□□□□□ -0.61
CDT1-202ENST00000562747 DNAH10OSP0CZ25 163 aa11.27□□□□□ -0.61
CDT1-202ENST00000562747 LELP1Q5T871 98 aa11.27□□□□□ -0.61
CDT1-202ENST00000562747 FAM231DQ6ZW35 169 aa11.27□□□□□ -0.61
CDT1-202ENST00000562747 TRAV8-6A0A0B4J262 113 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 ZNF727A8MUV8 499 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 SMIM17P0DL12 118 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 EVI2AP22794 236 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 SSTP61278 116 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 ZNF56Q15929 161 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 Q9UF83 564 aa11.26□□□□□ -0.61
CDT1-202ENST00000562747 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 CTRLP40313 264 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 OR10J3Q5JRS4 329 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 WDR73Q6P4I2 378 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 LYZL1Q6UWQ5 148 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 SMDT1Q9H4I9 107 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 KIF25-AS1Q9Y6Z4 181 aa11.25□□□□□ -0.61
CDT1-202ENST00000562747 GATCO43716 136 aaKnown RBP11.24□□□□□ -0.61
CDT1-202ENST00000562747 LINC00315P59091 139 aa11.24□□□□□ -0.61
CDT1-202ENST00000562747 RPL36AP83881 106 aaKnown RBP11.24□□□□□ -0.61
CDT1-202ENST00000562747 PEA15Q15121 130 aa11.24□□□□□ -0.61
CDT1-202ENST00000562747 FAM74A3Q4VXF1 159 aa11.24□□□□□ -0.61
CDT1-202ENST00000562747 OR10G8Q8NGN5 311 aa11.24□□□□□ -0.61
CDT1-202ENST00000562747 RPL36ALQ969Q0 106 aaKnown RBP11.24□□□□□ -0.61
CDT1-202ENST00000562747 CNFNQ9BYD5 112 aa11.24□□□□□ -0.61
CDT1-202ENST00000562747 TRBV7-3A0A075B6L6 115 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 A0A087WWC5 75 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 F5H697 171 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 TRGC1P0CF51 173 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 ERVFC1-1P60608 527 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 CT83Q5H943 113 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 LINC01556Q5JQF7 62 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 C10orf126Q8N4M7 172 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 MSRB1Q9NZV6 116 aa11.23□□□□□ -0.61
CDT1-202ENST00000562747 A8MWL6 223 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms