RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 TRBV20OR9-2A0A075B6H5 130 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 TRBV6-4A0A1B0GX49 114 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 SMIM17P0DL12 118 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 TTC32Q5I0X7 151 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 OR10J3Q5JRS4 329 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 Q6ZR54 194 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 COMMD7Q86VX2 200 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 C6orf223Q8N319 242 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 OCC1Q8TAD7 63 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 PTH2Q96A98 100 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 RNASE7Q9H1E1 156 aaKnown RBP6.96□□□□□ -1.3
HERC1-212ENST00000561348 BIN3Q9NQY0 253 aa6.96□□□□□ -1.3
HERC1-212ENST00000561348 VPS13DQ5THJ4 4388 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 XKRY2A2RUG3 117 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 RHODO00212 210 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 RTL8CO15255 209 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 CIDEAO60543 219 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 MGPP08493 103 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 RPS20P60866 119 aaKnown RBP6.95□□□□□ -1.3
HERC1-212ENST00000561348 DNLZQ5SXM8 178 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 WFDC10BQ8IUB3 73 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 FER1L6-AS1Q8NA97 138 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 NUDT10Q8NFP7 164 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 ATP6V0E2Q8NHE4 81 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 NUDT11Q96G61 164 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 SFRP2Q96HF1 295 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 SMIM7Q9BQ49 75 aa6.95□□□□□ -1.3
HERC1-212ENST00000561348 TRAV8-6A0A0B4J262 113 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 ZNF727A8MUV8 499 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 ZFP2Q6ZN57 461 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 LINC00336Q6ZUF6 198 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 SH2D6Q7Z4S9 175 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 ZNF575Q86XF7 245 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 UPK3BQ9BT76 320 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 SCRT2Q9NQ03 307 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 Q9UF83 564 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 LY96Q9Y6Y9 160 aa6.94□□□□□ -1.3
HERC1-212ENST00000561348 TRAV9-2A0A087WT02 112 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 C19orf71A6NCJ1 209 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 TMEM250H0YL14 139 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 K7EN84 100 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 GATCO43716 136 aaKnown RBP6.93□□□□□ -1.3
HERC1-212ENST00000561348 IGHV3-30P01768 117 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 IGHV3-33P01772 117 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 CRYGDP07320 174 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 IGHV3-30-3P0DP02 117 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 IGHV3-30-5P0DP03 117 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 MED14OSP0DP75 135 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 EVI2AP22794 236 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 ERVFC1-1P60608 527 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 PIK3CD-AS1Q5SR53 167 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 SMIM12Q96EX1 92 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 RPP21Q9H633 154 aaKnown RBP6.93□□□□□ -1.3
HERC1-212ENST00000561348 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
HERC1-212ENST00000561348 SNAI2O43623 268 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 OR5AL1P0C617 328 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 TWIST1Q15672 202 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 LYPD6BQ8NI32 183 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 AP1S3Q96PC3 154 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 GTSF1LQ9H1H1 148 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 MSRB1Q9NZV6 116 aa6.92□□□□□ -1.3
HERC1-212ENST00000561348 IGHV3-38A0A0C4DH36 116 aa6.91□□□□□ -1.3
HERC1-212ENST00000561348 SRP19P09132 144 aaKnown RBP6.91□□□□□ -1.3
HERC1-212ENST00000561348 CXCL1P09341 107 aa6.91□□□□□ -1.3
HERC1-212ENST00000561348 LINC00315P59091 139 aa6.91□□□□□ -1.3
HERC1-212ENST00000561348 RPL36AP83881 106 aaKnown RBP6.91□□□□□ -1.3
HERC1-212ENST00000561348 PEA15Q15121 130 aa6.91□□□□□ -1.3
HERC1-212ENST00000561348 RPL36ALQ969Q0 106 aaKnown RBP6.91□□□□□ -1.3
HERC1-212ENST00000561348 SSBP4Q9BWG4 385 aaPredicted RBP6.91□□□□□ -1.3
HERC1-212ENST00000561348 F2Z2F3 143 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 GHRHP01286 108 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 IGLC6P0CF74 106 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 NTF3P20783 257 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 RAB4BP61018 213 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 CACNG7P62955 275 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
HERC1-212ENST00000561348 ADIRFQ15847 76 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 UFSP1Q6NVU6 142 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 PGLYRP4Q96LB8 373 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 Q9HAA7 133 aa6.9□□□□□ -1.3
HERC1-212ENST00000561348 EPPK1P58107 5090 aaKnown RBP6.89□□□□□ -1.31
HERC1-212ENST00000561348 A0A1W2PPQ1 181 aa6.89□□□□□ -1.31
HERC1-212ENST00000561348 TRGC1P0CF51 173 aa6.89□□□□□ -1.31
HERC1-212ENST00000561348 LELP1Q5T871 98 aa6.89□□□□□ -1.31
HERC1-212ENST00000561348 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.89□□□□□ -1.31
HERC1-212ENST00000561348 DEFB104AQ8WTQ1 72 aa6.89□□□□□ -1.31
HERC1-212ENST00000561348 BORCS7Q96B45 105 aa6.89□□□□□ -1.31
HERC1-212ENST00000561348 URGCP-MRPS24S4R325 110 aa6.89□□□□□ -1.31
HERC1-212ENST00000561348 TRBV7-3A0A075B6L6 115 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 A8MWL6 223 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 C9JQL5 133 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 TMEM262E9PQX1 116 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 EREGO14944 169 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 PSCAO43653 123 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 TMEM241Q24JQ0 296 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 KCNIP4Q6PIL6 250 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 SMIM15Q7Z3B0 74 aa6.88□□□□□ -1.31
HERC1-212ENST00000561348 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms