RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 ZNF56Q15929 161 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 ZNF575Q86XF7 245 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 C14orf178Q8N769 122 aaPredicted RBP8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 OR2D3Q8NGH3 330 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 OR10AG1Q8NH19 301 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 GTSF1LQ9H1H1 148 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 BIN3Q9NQY0 253 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 BOLA1Q9Y3E2 137 aa8.84□□□□□ -0.99
CTDSPL2-209ENST00000560620 P01737 135 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 CRYGDP07320 174 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 CXCL1P09341 107 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
CTDSPL2-209ENST00000560620 CEBPGP53567 150 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 TIRAPP58753 221 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 UFSP1Q6NVU6 142 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 SMIM12Q96EX1 92 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 TNFRSF18Q9Y5U5 241 aa8.83□□□□□ -1
CTDSPL2-209ENST00000560620 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 TRBV20OR9-2A0A075B6H5 130 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 XKRY2A2RUG3 117 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 RBFOX3A6NFN3 312 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 F5H697 171 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 IGLV2-8P01709 118 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 DNAH10OSP0CZ25 163 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 SMIM17P0DL12 118 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 GZMBP10144 247 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 RPS20P60866 119 aaKnown RBP8.82□□□□□ -1
CTDSPL2-209ENST00000560620 LELP1Q5T871 98 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 NFE4Q86UQ8 179 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 C10orf126Q8N4M7 172 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 EIF5A2Q9GZV4 153 aaKnown RBP8.82□□□□□ -1
CTDSPL2-209ENST00000560620 MSRB1Q9NZV6 116 aa8.82□□□□□ -1
CTDSPL2-209ENST00000560620 FAT2Q9NYQ8 4349 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 C16orf90A8MZG2 172 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 K7EP13 123 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 SNAI2O43623 268 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 IGHV3-30P01768 117 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 IGHV3-33P01772 117 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 OR5AL1P0C617 328 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 IGHV3-30-3P0DP02 117 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 IGHV3-30-5P0DP03 117 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 FER1L6-AS1Q8NA97 138 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 Q9UF83 564 aa8.81□□□□□ -1
CTDSPL2-209ENST00000560620 DNAH17Q9UFH2 4485 aa8.8□□□□□ -1
CTDSPL2-209ENST00000560620 C19orf71A6NCJ1 209 aa8.8□□□□□ -1
CTDSPL2-209ENST00000560620 EREGO14944 169 aa8.8□□□□□ -1
CTDSPL2-209ENST00000560620 RPL36AP83881 106 aaKnown RBP8.8□□□□□ -1
CTDSPL2-209ENST00000560620 TOR2AQ5JU69 321 aa8.8□□□□□ -1
CTDSPL2-209ENST00000560620 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
CTDSPL2-209ENST00000560620 RPL36ALQ969Q0 106 aaKnown RBP8.8□□□□□ -1
CTDSPL2-209ENST00000560620 AP1S3Q96PC3 154 aa8.8□□□□□ -1
CTDSPL2-209ENST00000560620 SSBP4Q9BWG4 385 aaPredicted RBP8.8□□□□□ -1
CTDSPL2-209ENST00000560620 A0A087WWC5 75 aa8.79□□□□□ -1
CTDSPL2-209ENST00000560620 PSCAO43653 123 aa8.79□□□□□ -1
CTDSPL2-209ENST00000560620 ERVFC1-1P60608 527 aa8.79□□□□□ -1
CTDSPL2-209ENST00000560620 RAB4BP61018 213 aa8.79□□□□□ -1
CTDSPL2-209ENST00000560620 LINC01556Q5JQF7 62 aa8.79□□□□□ -1
CTDSPL2-209ENST00000560620 Q9HAA7 133 aa8.79□□□□□ -1
CTDSPL2-209ENST00000560620 TRBV10-1A0A0K0K1A3 114 aa8.78□□□□□ -1
CTDSPL2-209ENST00000560620 TMEM250H0YL14 139 aa8.78□□□□□ -1
CTDSPL2-209ENST00000560620 MGPP08493 103 aa8.78□□□□□ -1
CTDSPL2-209ENST00000560620 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.78□□□□□ -1
CTDSPL2-209ENST00000560620 NUDT10Q8NFP7 164 aa8.78□□□□□ -1
CTDSPL2-209ENST00000560620 NUDT11Q96G61 164 aa8.78□□□□□ -1
CTDSPL2-209ENST00000560620 URGCP-MRPS24S4R325 110 aa8.78□□□□□ -1
CTDSPL2-209ENST00000560620 TRBV7-3A0A075B6L6 115 aa8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 LINC00694P0DN24 101 aa8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 CACNG7P62955 275 aa8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 LYZL1Q6UWQ5 148 aa8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 Q6ZRN7 208 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 LYPD6BQ8NI32 183 aa8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 OCC1Q8TAD7 63 aa8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 RNASE7Q9H1E1 156 aaKnown RBP8.77□□□□□ -1.01
CTDSPL2-209ENST00000560620 PKD1P98161 4303 aa8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 F2Z2F3 143 aa8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 K7EN84 100 aa8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 IGLC6P0CF74 106 aa8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 KCNIP4Q6PIL6 250 aa8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 RPP21Q9H633 154 aaKnown RBP8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 KIAA1109Q2LD37 5005 aa8.76□□□□□ -1.01
CTDSPL2-209ENST00000560620 IBA57-AS1B1ANH7 110 aa8.75□□□□□ -1.01
CTDSPL2-209ENST00000560620 FAM210AQ96ND0 272 aa8.75□□□□□ -1.01
CTDSPL2-209ENST00000560620 SMIM7Q9BQ49 75 aa8.75□□□□□ -1.01
CTDSPL2-209ENST00000560620 A0A087WX48 190 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 GATCO43716 136 aaKnown RBP8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 TRGC1P0CF51 173 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 NTF3P20783 257 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 UBE2D3P61077 147 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 UBE2D2P62837 147 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 TWIST1Q15672 202 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 Q8N3U1 123 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 NEXN-AS1Q8NBZ9 246 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 PKHD1P08F94 4074 aa8.74□□□□□ -1.01
CTDSPL2-209ENST00000560620 ZNF727A8MUV8 499 aa8.73□□□□□ -1.01
CTDSPL2-209ENST00000560620 TMEM262E9PQX1 116 aa8.73□□□□□ -1.01
CTDSPL2-209ENST00000560620 H7C1H1 209 aa8.73□□□□□ -1.01
CTDSPL2-209ENST00000560620 DAZ4Q86SG3 579 aaKnown RBP8.73□□□□□ -1.01
CTDSPL2-209ENST00000560620 OR10G8Q8NGN5 311 aa8.73□□□□□ -1.01
CTDSPL2-209ENST00000560620 DAZ3Q9NR90 486 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms