RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 C9JQL5 133 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 NDUFS6O75380 124 aaKnown RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 EIF3GO75821 320 aaKnown RBP eCLIP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SCGNO76038 276 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SFT2D2O95562 160 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 MT-ND4LP03901 98 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 PRM2P04554 102 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 CTXN2P0C2S0 81 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SEC11BP0C7V7 166 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 HTN1P15515 57 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 LPAR6P43657 344 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SULT1A2P50226 295 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 POLR2GP62487 172 aaKnown RBP eCLIP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 RPL30P62888 115 aaKnown RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 ERHP84090 104 aaKnown RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 RPL19P84098 196 aaKnown RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 CATR1Q13166 79 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 PPP1R1AQ13522 171 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SURF2Q15527 256 aaPredicted RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SPINK13Q1W4C9 94 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 TMEM128Q5BJH2 165 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 AADACL3Q5VUY0 350 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 Q6ZS49 121 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 CBLN2Q8IUK8 224 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 ARRDC1Q8N5I2 433 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 ARL6IP6Q8N6S5 226 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 C15orf54Q8N8G6 183 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 OR4X1Q8NH49 305 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 TERB2Q8NHR7 220 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 BLNKQ8WV28 456 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 TCTEX1D2Q8WW35 142 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 BAALCQ8WXS3 180 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 CHCHD10Q8WYQ3 142 aaPredicted RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 HIST1H2BAQ96A08 127 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 PINX1Q96BK5 328 aaKnown RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 ZC2HC1AQ96GY0 325 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 C12orf57Q99622 126 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 ZNF471Q9BX82 626 aaPredicted RBP1.69□□□□□ -2.14
LRRC28-218ENST00000560236 TMEM59Q9BXS4 323 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 LPAR5Q9H1C0 372 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 OR51M1Q9H341 326 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SMDT1Q9H4I9 107 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 AK3Q9UIJ7 227 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 PRNDQ9UKY0 176 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 RAB22AQ9UL26 194 aa1.69□□□□□ -2.14
LRRC28-218ENST00000560236 SYNE2Q8WXH0 6885 aaKnown RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 IGKV1D-8A0A087WSZ0 117 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 A0A087WWC5 75 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 TMEM235A6NFC5 223 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 GGTLC3B5MD39 225 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 F6UB75 175 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 M0R2Z0 102 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 LECT2O14960 151 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 GATCO43716 136 aaKnown RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 FABP1P07148 127 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 CRYGAP11844 174 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 TPT1P13693 172 aaKnown RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 PVALBP20472 110 aaPredicted RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 S100PP25815 95 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 HRH1P35367 487 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 SUB1P53999 127 aaKnown RBP eCLIP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 DEFB1P60022 68 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 YPEL3P61236 119 aaPredicted RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 CACNG7P62955 275 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 PRR3P79522 188 aaKnown RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 PEA15Q15121 130 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 RHEBQ15382 184 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 PSG3Q16557 428 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 CDNFQ49AH0 187 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 RNASE10Q5GAN6 216 aaKnown RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 C1orf194Q5T5A4 169 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 DPPA3Q6W0C5 159 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 KRTAP13-1Q8IUC0 172 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 MTURNQ8N3F0 131 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 NKAPP1Q8N9T2 125 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 INO80EQ8NBZ0 244 aaPredicted RBP1.68□□□□□ -2.14
LRRC28-218ENST00000560236 OR10G4Q8NGN3 311 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 OR10G9Q8NGN4 311 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 OR10R2Q8NGX6 335 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 Q8TAT8 98 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 DPH3Q96FX2 82 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 C2orf50Q96LR7 162 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 TCEAL7Q9BRU2 100 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 SLC25A31Q9H0C2 315 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 ATG5Q9H1Y0 275 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 SMCO4Q9NRQ5 59 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 OR5AC2Q9NZP5 309 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 COMMD9Q9P000 198 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 FUT9Q9Y231 359 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 OR51B2Q9Y5P1 312 aa1.68□□□□□ -2.14
LRRC28-218ENST00000560236 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 TRAV12-2A0A075B6T6 113 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 TRAV1-1A0A0B4J248 108 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 C7orf77A4D0Y5 90 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 METTL21EPA6NDL7 271 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 MEIS3P1A6NDR6 274 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 CRYM-AS1A6NIL9 109 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 INS-IGF2F8WCM5 200 aa1.67□□□□□ -2.14
LRRC28-218ENST00000560236 SPINK4O60575 86 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms