RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 NUP35Q8NFH5 326 aa8.72□□□□□ -1.01
GABPB1-208ENST00000558970 PTH2Q96A98 100 aa8.72□□□□□ -1.01
GABPB1-208ENST00000558970 C18orf15Q96N68 181 aa8.72□□□□□ -1.01
GABPB1-208ENST00000558970 AP1S3Q96PC3 154 aa8.72□□□□□ -1.01
GABPB1-208ENST00000558970 A0A096LPF7 62 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 LOC100131303A0A0U1RQF7 123 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 F5H697 171 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 PAX4O43316 350 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 SMIM17P0DL12 118 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 NDUFAF3Q9BU61 184 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 GFRA4Q9GZZ7 299 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 NAT8BQ9UHF3 227 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 HHLA3Q9XRX5 114 aa8.71□□□□□ -1.02
GABPB1-208ENST00000558970 CARHSP1Q9Y2V2 147 aaKnown RBP8.71□□□□□ -1.02
GABPB1-208ENST00000558970 EPPK1P58107 5090 aaKnown RBP8.71□□□□□ -1.02
GABPB1-208ENST00000558970 SMIM27A0A1W2PRY6 76 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 PPP1R2P9O14990 202 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 CRYGDP07320 174 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 EVI2AP22794 236 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 FOXA3P55318 350 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-208ENST00000558970 FAM3BP58499 235 aaPredicted RBP8.7□□□□□ -1.02
GABPB1-208ENST00000558970 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 MRPL54Q6P161 138 aaKnown RBP8.7□□□□□ -1.02
GABPB1-208ENST00000558970 Q6ZSN1 163 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 ANAPC16Q96DE5 110 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 VSIG2Q96IQ7 327 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 RPS10P5Q9NQ39 176 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 PRO0255Q9UI72 69 aa8.7□□□□□ -1.02
GABPB1-208ENST00000558970 A0A1B0GUT8 65 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 TRGC1P0CF51 173 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 P0DMU3 169 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 FAM231AP0DMU4 169 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 FAM231CP0DMU5 169 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 GYPEP15421 78 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 GATA1P15976 413 aaPredicted RBP8.69□□□□□ -1.02
GABPB1-208ENST00000558970 CRYBA4P53673 196 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 PIK3CD-AS1Q5SR53 167 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 SLC25A29Q8N8R3 303 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 CLRN3Q8NCR9 226 aa8.69□□□□□ -1.02
GABPB1-208ENST00000558970 DNAH1Q9P2D7 4330 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 PLECQ15149 4684 aaKnown RBP8.68□□□□□ -1.02
GABPB1-208ENST00000558970 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 RHODO00212 210 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 CAMPP49913 170 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 UFSP1Q6NVU6 142 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 ZFP2Q6ZN57 461 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 APLNQ9ULZ1 77 aa8.68□□□□□ -1.02
GABPB1-208ENST00000558970 K7EQD1 137 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 SMIM15Q7Z3B0 74 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 SVBPQ8N300 66 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 DPH3P1Q9H4G8 78 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 Q9UF83 564 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 URGCP-MRPS24S4R325 110 aa8.67□□□□□ -1.02
GABPB1-208ENST00000558970 TRAV26-2A0A0B4J265 109 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 GAGE12JA6NER3 117 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 SNAPINO95295 136 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 GAGE1Q13065 139 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 GAGE4Q13068 117 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 GAGE5Q13069 117 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 SLAQ13239 276 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 RIGQ13278 110 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 RHEBQ15382 184 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 RHOHQ15669 191 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 GAGE13Q4V321 117 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 ICOSQ9Y6W8 199 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 KIF25-AS1Q9Y6Z4 181 aa8.66□□□□□ -1.02
GABPB1-208ENST00000558970 TRBV6-4A0A1B0GX49 114 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 SRIP30626 198 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 SUMO4Q6EEV6 95 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 WDR73Q6P4I2 378 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 PRADC1Q9BSG0 188 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 CTDSP1Q9GZU7 261 aa8.65□□□□□ -1.02
GABPB1-208ENST00000558970 CIDEAO60543 219 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 LY6G6CO95867 125 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 LINC00315P59091 139 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 RAB4BP61018 213 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 KCNIP4Q6PIL6 250 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 ATRAIDQ6UW56 229 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 AMN1Q8IY45 258 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 FAM210BQ96KR6 192 aa8.64□□□□□ -1.03
GABPB1-208ENST00000558970 LCE6AA0A183 80 aa8.63□□□□□ -1.03
GABPB1-208ENST00000558970 HBBP68871 147 aa8.63□□□□□ -1.03
GABPB1-208ENST00000558970 MRPL23Q16540 153 aaKnown RBP8.63□□□□□ -1.03
GABPB1-208ENST00000558970 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
GABPB1-208ENST00000558970 LYSTQ99698 3801 aa8.63□□□□□ -1.03
GABPB1-208ENST00000558970 A0A087WWC5 75 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 H3BNG1 76 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 NCR2O95944 276 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 S100PP25815 95 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 NEXN-AS1Q8NBZ9 246 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
GABPB1-208ENST00000558970 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
GABPB1-208ENST00000558970 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
GABPB1-208ENST00000558970 SMKR1H3BMG3 65 aa8.61□□□□□ -1.03
GABPB1-208ENST00000558970 TCTAP57738 103 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms