RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 H3BMG7 143 aa11.32□□□□□ -0.6
NEK9-209ENST00000556170 TCTEX1D4Q5JR98 221 aa11.32□□□□□ -0.6
NEK9-209ENST00000556170 SMIM2Q9BVW6 85 aa11.32□□□□□ -0.6
NEK9-209ENST00000556170 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 RBAKDNA6NC62 111 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 IGLC6P0CF74 106 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 RAX2Q96IS3 184 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 K7ERJ3 54 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 ZNF493Q6ZR52 646 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
NEK9-209ENST00000556170 RPL13AP40429 203 aaKnown RBP11.3□□□□□ -0.6
NEK9-209ENST00000556170 GAGE2BQ13066 116 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 PPP1R17O96001 155 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 SCRT2Q9NQ03 307 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 ZNF815PA8K554 130 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 EDN2P20800 178 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 C9orf47Q6ZRZ4 202 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 UBE2E2Q96LR5 201 aa11.3□□□□□ -0.6
NEK9-209ENST00000556170 TNFRSF18Q9Y5U5 241 aa11.29□□□□□ -0.6
NEK9-209ENST00000556170 A6NDX4 124 aa11.29□□□□□ -0.6
NEK9-209ENST00000556170 SCGB1A1P11684 91 aa11.29□□□□□ -0.6
NEK9-209ENST00000556170 BOD1L2Q8IYS8 172 aa11.29□□□□□ -0.6
NEK9-209ENST00000556170 CHAC1Q9BUX1 264 aa11.29□□□□□ -0.6
NEK9-209ENST00000556170 TP53TG1Q9Y2A0 90 aa11.29□□□□□ -0.6
NEK9-209ENST00000556170 TMEM238LA0A1B0GVL6 79 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 A6NJY4 79 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 GATA3P23771 443 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
NEK9-209ENST00000556170 PRR9Q5T870 116 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 YAE1D1Q9NRH1 226 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 WFDC2Q14508 124 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 SDHAF1A6NFY7 115 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 H7C1H1 209 aa11.28□□□□□ -0.6
NEK9-209ENST00000556170 LGALS3P17931 250 aaKnown RBP11.27□□□□□ -0.6
NEK9-209ENST00000556170 AGRNO00468 2067 aa11.27□□□□□ -0.6
NEK9-209ENST00000556170 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.61
NEK9-209ENST00000556170 SLURP1P55000 103 aa11.27□□□□□ -0.61
NEK9-209ENST00000556170 IGHG4P01861 327 aa11.27□□□□□ -0.61
NEK9-209ENST00000556170 IGKV3OR2-268A0A0C4DH90 116 aa11.26□□□□□ -0.61
NEK9-209ENST00000556170 MRPL53Q96EL3 112 aaKnown RBP11.26□□□□□ -0.61
NEK9-209ENST00000556170 RNF185Q96GF1 192 aa11.26□□□□□ -0.61
NEK9-209ENST00000556170 XCL2Q9UBD3 114 aa11.26□□□□□ -0.61
NEK9-209ENST00000556170 IGHV3-16A0A0C4DH30 117 aa11.26□□□□□ -0.61
NEK9-209ENST00000556170 VCYO14598 125 aa11.26□□□□□ -0.61
NEK9-209ENST00000556170 IGHV4OR15-8A0A075B7B6 117 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 A0A087WW49 117 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 HERV-K104P63124 156 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 VCX2Q9H322 139 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 VPREB3Q9UKI3 123 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 IGHV3-53P01767 116 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 PEMTQ9UBM1 199 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 PIFOQ8TCI5 191 aa11.25□□□□□ -0.61
NEK9-209ENST00000556170 PHLDA1Q8WV24 401 aaPredicted RBP11.25□□□□□ -0.61
NEK9-209ENST00000556170 PLNP26678 52 aa11.24□□□□□ -0.61
NEK9-209ENST00000556170 GAGE5Q13069 117 aa11.24□□□□□ -0.61
NEK9-209ENST00000556170 GAGE6Q13070 117 aa11.24□□□□□ -0.61
NEK9-209ENST00000556170 MDFICQ9P1T7 246 aa11.24□□□□□ -0.61
NEK9-209ENST00000556170 LENEPQ9Y5L5 61 aa11.24□□□□□ -0.61
NEK9-209ENST00000556170 TRBV20-1A0A075B6N2 111 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 IGHV1OR15-1A0A075B7D0 117 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 F8W1H4 67 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 H3BUA1 57 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 CRXO43186 299 aaPredicted RBP11.23□□□□□ -0.61
NEK9-209ENST00000556170 HIST2H2BCQ6DN03 193 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 IGSF10Q6WRI0 2623 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 ZFAND2AQ8N6M9 145 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 HECTD1Q9ULT8 2610 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 ODF1Q14990 250 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 APRG1Q8IVJ8 170 aa11.23□□□□□ -0.61
NEK9-209ENST00000556170 PRSS29PA6NIE9 313 aa11.22□□□□□ -0.61
NEK9-209ENST00000556170 F8VRH5 84 aa11.22□□□□□ -0.61
NEK9-209ENST00000556170 RPL39P62891 51 aaKnown RBP11.22□□□□□ -0.61
NEK9-209ENST00000556170 STHQ8IWL8 128 aa11.22□□□□□ -0.61
NEK9-209ENST00000556170 RNASE13Q5GAN3 156 aaKnown RBP11.22□□□□□ -0.61
NEK9-209ENST00000556170 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
NEK9-209ENST00000556170 A0A0U1RRA0 63 aa11.22□□□□□ -0.61
NEK9-209ENST00000556170 GATD1Q8NB37 220 aa11.22□□□□□ -0.61
NEK9-209ENST00000556170 TRBV25-1A0A075B6N4 114 aa11.21□□□□□ -0.61
NEK9-209ENST00000556170 Q8N1Y9 231 aa11.21□□□□□ -0.61
NEK9-209ENST00000556170 IGHV3-38A0A0C4DH36 116 aa11.21□□□□□ -0.61
NEK9-209ENST00000556170 A8MWV9 139 aa11.21□□□□□ -0.61
NEK9-209ENST00000556170 PRADC1Q9BSG0 188 aa11.21□□□□□ -0.61
NEK9-209ENST00000556170 TRGV11A0A075B6L2 103 aa11.21□□□□□ -0.62
NEK9-209ENST00000556170 IGKV2D-26A0A0A0MRZ7 120 aa11.21□□□□□ -0.62
NEK9-209ENST00000556170 CD28P10747 220 aa11.21□□□□□ -0.62
NEK9-209ENST00000556170 NSUN5P1Q3KNT7 163 aa11.21□□□□□ -0.62
NEK9-209ENST00000556170 A0A087WX48 190 aa11.2□□□□□ -0.62
NEK9-209ENST00000556170 TMEM262E9PQX1 116 aa11.2□□□□□ -0.62
NEK9-209ENST00000556170 PGPEP1Q9NXJ5 209 aa11.2□□□□□ -0.62
NEK9-209ENST00000556170 A0A096LNJ9 63 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 RNF183Q96D59 192 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 TRAV2A0A0B4J234 112 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 LGALS1P09382 135 aaKnown RBP11.19□□□□□ -0.62
NEK9-209ENST00000556170 FXYD2P54710 66 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 KRTAP10-9P60411 292 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 SUMO4Q6EEV6 95 aa11.19□□□□□ -0.62
NEK9-209ENST00000556170 PRM2P04554 102 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms