RNA–Protein interactions for RNA: ENST00000556142.5

HNRNPC-223, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-223ENST00000556142 GIG44P09565 113 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 STHQ8IWL8 128 aa6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 C1orf158Q8N1D5 194 aa6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 C14orf178Q8N769 122 aaPredicted RBP6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 MRAP2Q96G30 205 aa6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 JPT2Q9H910 190 aa6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 PGPEP1Q9NXJ5 209 aa6.91□□□□□ -1.3
HNRNPC-223ENST00000556142 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.3
HNRNPC-223ENST00000556142 A0A096LNJ9 63 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 LOC389332A0A1B0GUA5 103 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 PMCHL1Q16048 86 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 WFDC9Q8NEX5 89 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 PRSS3P2Q8NHM4 247 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 PTH2Q96A98 100 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 WFDC10AQ9H1F0 79 aa6.9□□□□□ -1.31
HNRNPC-223ENST00000556142 AGRNO00468 2067 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 TRAV26-2A0A0B4J265 109 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 CRYGDP07320 174 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 C3orf79P0CE67 100 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 INSL3P51460 131 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 C11orf72Q8NBR9 251 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 RASL10AQ92737 203 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 AP1S3Q96PC3 154 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 NOTCH1P46531 2555 aa6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 PRKDCP78527 4128 aaKnown RBP6.89□□□□□ -1.31
HNRNPC-223ENST00000556142 CBY3A6NI87 242 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 INSP01308 110 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 C9orf66Q5T8R8 295 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 LINC00173Q6ZV60 143 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 FA2HQ7L5A8 372 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 LINC01587Q99440 93 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 MAP1LC3AQ9H492 121 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 AP5S1Q9NUS5 200 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 XCL2Q9UBD3 114 aa6.88□□□□□ -1.31
HNRNPC-223ENST00000556142 PIK3CD-AS1Q5SR53 167 aa6.87□□□□□ -1.31
HNRNPC-223ENST00000556142 Q8N8P6 123 aa6.87□□□□□ -1.31
HNRNPC-223ENST00000556142 SYT8Q8NBV8 401 aa6.87□□□□□ -1.31
HNRNPC-223ENST00000556142 CSNK1G2-AS1Q8NCQ2 148 aa6.87□□□□□ -1.31
HNRNPC-223ENST00000556142 IL17DQ8TAD2 202 aa6.87□□□□□ -1.31
HNRNPC-223ENST00000556142 MUC4Q99102 2169 aa6.87□□□□□ -1.31
HNRNPC-223ENST00000556142 AZU1P20160 251 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 KRTDAPP60985 99 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 UFSP1Q6NVU6 142 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 TEX43Q6ZNM6 134 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 SPATA12Q7Z6I5 190 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 RPL39LQ96EH5 51 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 A0A087WWL8 130 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 LEPROTL1O95214 131 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 SCGB1D1O95968 90 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 NUTF2P61970 127 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 ZNF415Q09FC8 603 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 ZNF876PQ49A33 203 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 SUMO4Q6EEV6 95 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 MORN3Q6PF18 240 aaPredicted RBP6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 C20orf78Q9BR46 151 aa6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 NXT2Q9NPJ8 142 aaKnown RBP6.86□□□□□ -1.31
HNRNPC-223ENST00000556142 M0R2P5 195 aa6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 MGPP08493 103 aa6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 HTN1P15515 57 aa6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 RPL35AP18077 110 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 BTF3P20290 206 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 RPL32P62910 135 aaKnown RBP6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 ZNF664Q8N3J9 261 aa6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 SPXQ9BT56 116 aa6.85□□□□□ -1.31
HNRNPC-223ENST00000556142 TRBV6-5A0A0K0K1A5 114 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 M0QY20 66 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 SMIM17P0DL12 118 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 FCER1GP30273 86 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 POLR2KP53803 58 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 RNASE8Q8TDE3 154 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 MCRIP2Q9BUT9 160 aaKnown RBP6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 SMIM2Q9BVW6 85 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 EDA2RQ9HAV5 297 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 HSPB8Q9UJY1 196 aa6.84□□□□□ -1.31
HNRNPC-223ENST00000556142 SORL1Q92673 2214 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 PLAC8L1A1L4L8 177 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 SYS1-DBNDD2H3BUS1 97 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 PPP1R17O96001 155 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 HBDP02042 147 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 IGLL1P15814 213 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 S100A12P80511 92 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 ZNF705AQ6ZN79 300 aaPredicted RBP6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 TMEM70Q9BUB7 260 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 CMYA5Q8N3K9 4069 aa6.83□□□□□ -1.32
HNRNPC-223ENST00000556142 PCP4L1A6NKN8 68 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 RS1O15537 224 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 NDUFAF3Q9BU61 184 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 A8MWV9 139 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 TCAPO15273 167 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 PKIAP61925 76 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 LAGE3Q14657 143 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 CFAP126Q5VTH2 177 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 PET117Q6UWS5 81 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 TMEM263Q8WUH6 116 aaKnown RBP6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 C1QTNF4Q9BXJ3 329 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 MAP1LC3CQ9BXW4 147 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 CSTL1Q9H114 145 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 GOLT1BQ9Y3E0 138 aa6.82□□□□□ -1.32
HNRNPC-223ENST00000556142 IGHV3OR16-12A0A075B7B8 117 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms