RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 NXPH4O95158 308 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 CRYGDP07320 174 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 CFAP46Q8IYW2 2715 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 IGIPA6NJ69 53 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 OVOL1O14753 267 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 SLC25A20O43772 301 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 IGF1P05019 195 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 PTH2Q96A98 100 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 PHLDA3Q9Y5J5 127 aa8.07□□□□□ -1.12
MTHFD1-210ENST00000555252 APRG1Q8IVJ8 170 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 USMG5Q96IX5 58 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 KMT2BQ9UMN6 2715 aaPredicted RBP8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHV3-66A0A0C4DH42 116 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 NDUFA4O00483 81 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 S100A4P26447 101 aaKnown RBP8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 ARL3P36405 182 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 RPL13AP40429 203 aaKnown RBP8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 MRPL23Q16540 153 aaKnown RBP8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 GPHB5Q86YW7 130 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 C10orf105Q8TEF2 133 aa8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 RPL39LQ96EH5 51 aaKnown RBP8.06□□□□□ -1.12
MTHFD1-210ENST00000555252 ABCA4P78363 2273 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 SNCGO76070 127 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 GAGE2BQ13066 116 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 GAGE2EQ4V326 116 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 TMEM219Q86XT9 240 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 C16orf92Q96LL3 132 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 CCL19Q99731 98 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 GAGE2DQ9UEU5 116 aa8.05□□□□□ -1.12
MTHFD1-210ENST00000555252 COL6A6A6NMZ7 2263 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 A0A0J9YX75 114 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 DUSP14O95147 198 aaKnown RBP8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 ZNF876PQ49A33 203 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 ZFAND2AQ8N6M9 145 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 KLHL30-AS1Q8NEE0 82 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 OR10J6PQ8NGY7 276 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHV4-61A0A0C4DH41 118 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 J3QQQ9 107 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 VCYO14598 125 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 TSHBP01222 138 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHV3-33P01772 117 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHG2P01859 326 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 LGALS3P17931 250 aaKnown RBP8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 POLR2KP53803 58 aaKnown RBP8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 ATXN8Q156A1 80 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 PRR9Q5T870 116 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 C14orf178Q8N769 122 aaPredicted RBP8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 FAM19A4Q96LR4 140 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 AMELXQ99217 191 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 KIR2DL4Q99706 377 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 TP53TG1Q9Y2A0 90 aa8.04□□□□□ -1.12
MTHFD1-210ENST00000555252 CHD6Q8TD26 2715 aa8.03□□□□□ -1.12
MTHFD1-210ENST00000555252 A6NDX4 124 aa8.03□□□□□ -1.12
MTHFD1-210ENST00000555252 LEPROTO15243 131 aa8.03□□□□□ -1.12
MTHFD1-210ENST00000555252 MGPP08493 103 aa8.03□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHV3OR16-13A0A075B7E8 117 aa8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHV3-74A0A0B4J1X5 117 aa8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 TRBV6-5A0A0K0K1A5 114 aa8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 C9JAW5 83 aa8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 NDUFV3P56181 108 aaKnown RBP8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 TMEM263Q8WUH6 116 aaKnown RBP8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 KIF25-AS1Q9Y6Z4 181 aa8.02□□□□□ -1.12
MTHFD1-210ENST00000555252 IGHV3OR16-10A0A075B7F0 116 aa8.02□□□□□ -1.13
MTHFD1-210ENST00000555252 IGHV3-49A0A0A0MS15 119 aa8.02□□□□□ -1.13
MTHFD1-210ENST00000555252 NHLRC4P0CG21 123 aaPredicted RBP8.02□□□□□ -1.13
MTHFD1-210ENST00000555252 TRBV30A0A0K0K1B3 111 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 TRBV27A0A0K0K1C4 114 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 GAGE12JA6NER3 117 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 GAGE7O76087 117 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 GAGE12FP0CL80 117 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 GAGE12GP0CL81 117 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 GAGE12IP0CL82 117 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 IFITM1P13164 125 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 GAGE4Q13068 117 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 RHOHQ15669 191 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 ANXA2RQ3ZCQ2 193 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 BRD3OSQ6XYD6 125 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 Q6ZS46 218 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 ZNF580Q9UK33 172 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 RNASE3P12724 160 aaKnown RBP8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 DSCR9P59020 149 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 LINC00315P59091 139 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 TTC32Q5I0X7 151 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 TMEM170BQ5T4T1 132 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 SS18L2Q9UHA2 77 aa8.01□□□□□ -1.13
MTHFD1-210ENST00000555252 HRNRQ86YZ3 2850 aaPredicted RBP8□□□□□ -1.13
MTHFD1-210ENST00000555252 A4D1N5 150 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 SOCS3O14543 225 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 MSMBP08118 114 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 GATA3P23771 443 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 ATP5J2P56134 94 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 LINC01620Q4KN68 170 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 Q8N1Y9 231 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 RAX2Q96IS3 184 aa8□□□□□ -1.13
MTHFD1-210ENST00000555252 BBC3Q96PG8 261 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms