RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 C11orf72Q8NBR9 251 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 NUP35Q8NFH5 326 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 OR11H2Q8NH07 326 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 SFRP2Q96HF1 295 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 TXNDC17Q9BRA2 123 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 RPP21Q9H633 154 aaKnown RBP2.23□□□□□ -2.05
SEC23A-208ENST00000555017 OSTCQ9NRP0 149 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 IL36BQ9NZH7 164 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 RNF24Q9Y225 148 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 ZFP30Q9Y2G7 519 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 PKD1L1Q8TDX9 2849 aa2.23□□□□□ -2.05
SEC23A-208ENST00000555017 MGAM2Q2M2H8 2515 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 TRAV26-2A0A0B4J265 109 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 TRAV21A0A0B4J279 112 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 LOC100131303A0A0U1RQF7 123 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 SERTM2A0A1B0GWG4 89 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 A0A1W2PPQ1 181 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 SMIM27A0A1W2PRY6 76 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 HIGD1CA8MV81 97 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 USP17L23D6RBM5 183 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 M0R381 172 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 GAGE7O76087 117 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 SNAPINO95295 136 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 NCR2O95944 276 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 INSP01308 110 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 S100A9P06702 114 aaKnown RBP2.22□□□□□ -2.05
SEC23A-208ENST00000555017 GAGE12FP0CL80 117 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 GAGE12GP0CL81 117 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 GAGE12IP0CL82 117 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 P0DMU3 169 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 FAM231AP0DMU4 169 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 FAM231CP0DMU5 169 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 DEFB130BP0DP73 79 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 DEFB130AP0DP74 79 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 EVI2AP22794 236 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 S100A7P31151 101 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 SEC61BP60468 96 aaKnown RBP2.22□□□□□ -2.05
SEC23A-208ENST00000555017 GAGE1Q13065 139 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 GAGE4Q13068 117 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 FAM162BQ5T6X4 162 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 ZNF705AQ6ZN79 300 aaPredicted RBP2.22□□□□□ -2.05
SEC23A-208ENST00000555017 FAM231DQ6ZW35 169 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 COX8CQ7Z4L0 72 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 ZFP82Q8N141 532 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 C14orf178Q8N769 122 aaPredicted RBP2.22□□□□□ -2.05
SEC23A-208ENST00000555017 C9orf85Q96MD7 179 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 NDFIP1Q9BT67 221 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 TMEM208Q9BTX3 173 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 SMDT1Q9H4I9 107 aa2.22□□□□□ -2.05
SEC23A-208ENST00000555017 NOP10Q9NPE3 64 aaKnown RBP2.22□□□□□ -2.05
SEC23A-208ENST00000555017 TRGV1A0A0A0MS02 117 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 A0A0J9YWU9 116 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 A0A1B0GXF2 115 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 NUPR1O60356 82 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 SCGB1D1O95968 90 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 MT-ND4LP03901 98 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 MGPP08493 103 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 CFC1BP0CG36 223 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 CFC1P0CG37 223 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 HTN3P15516 51 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 NTF3P20783 257 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 S100A1P23297 94 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 TSPOP30536 169 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 ASIPP42127 132 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 RPS10P46783 165 aaKnown RBP2.21□□□□□ -2.06
SEC23A-208ENST00000555017 CMC4P56277 68 aaPredicted RBP2.21□□□□□ -2.06
SEC23A-208ENST00000555017 LINC00315P59091 139 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 RAB4BP61018 213 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 IQCJQ1A5X6 159 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 KRTAP21-3Q3LHN1 58 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 FAM74A4Q5TZK3 123 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 FAM222AQ5U5X8 452 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 MORN3Q6PF18 240 aaPredicted RBP2.21□□□□□ -2.06
SEC23A-208ENST00000555017 FAM159AQ6UWV7 190 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 TMEM136Q6ZRR5 245 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 NEGR1Q7Z3B1 354 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 AMN1Q8IY45 258 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 SVBPQ8N300 66 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 ARL6IP6Q8N6S5 226 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 C15orf54Q8N8G6 183 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 FER1L6-AS1Q8NA97 138 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 Q8NAQ8 132 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 RNASE8Q8TDE3 154 aaKnown RBP2.21□□□□□ -2.06
SEC23A-208ENST00000555017 TSKUQ8WUA8 353 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 RPL39LQ96EH5 51 aaKnown RBP2.21□□□□□ -2.06
SEC23A-208ENST00000555017 RNF185Q96GF1 192 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 RCHY1Q96PM5 261 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 ODF3Q96PU9 254 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 LY96Q9Y6Y9 160 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 KIF25-AS1Q9Y6Z4 181 aa2.21□□□□□ -2.06
SEC23A-208ENST00000555017 A0A087WWC5 75 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 A0A096LPF7 62 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 A0A0J9YY99 117 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 A8MZ25 164 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 PHOX2AO14813 284 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 SNAI2O43623 268 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 NDUFS6O75380 124 aaKnown RBP2.2□□□□□ -2.06
SEC23A-208ENST00000555017 TRGC2P03986 189 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 CRYGDP07320 174 aa2.2□□□□□ -2.06
SEC23A-208ENST00000555017 S100A4P26447 101 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms