RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 IGHV3OR16-12A0A075B7B8 117 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 LINC01546A6NGU7 62 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 PRSS47A8MTI9 375 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 RAB4AP20338 218 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 SLAQ13239 276 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 BTF3L4Q96K17 158 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 ZNF479Q96JC4 524 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 GNB1LQ9BYB4 327 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 PKD1P98161 4303 aa4.74□□□□□ -1.65
LINC00517-202ENST00000554257 A0A1B0GW15 77 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 XKRY2A2RUG3 117 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 GATA1P15976 413 aaPredicted RBP4.73□□□□□ -1.65
LINC00517-202ENST00000554257 EVI2AP22794 236 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 HBBP68871 147 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 VSIG2Q96IQ7 327 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 IGLV2-18A0A075B6J9 118 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 ZNF876PQ49A33 203 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 DEFB121Q5J5C9 76 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 FAM104BQ5XKR9 115 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 URGCP-MRPS24S4R325 110 aa4.73□□□□□ -1.65
LINC00517-202ENST00000554257 M0QY20 66 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 LINC00310P59036 64 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 MRPL51Q4U2R6 128 aaKnown RBP4.72□□□□□ -1.65
LINC00517-202ENST00000554257 MRPL54Q6P161 138 aaKnown RBP4.72□□□□□ -1.65
LINC00517-202ENST00000554257 URB1-AS1Q96HZ7 61 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 TGP01266 2768 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 RYR2Q92736 4967 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 C14orf178Q8N769 122 aaPredicted RBP4.72□□□□□ -1.65
LINC00517-202ENST00000554257 FRZBQ92765 325 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 PHLDA3Q9Y5J5 127 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 DNAH11Q96DT5 4516 aa4.72□□□□□ -1.65
LINC00517-202ENST00000554257 A8MWV9 139 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 M0R381 172 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 IGHV3-53P01767 116 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 HTN1P15515 57 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 RPS10P46783 165 aaKnown RBP4.71□□□□□ -1.65
LINC00517-202ENST00000554257 RAB4BP61018 213 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 SUMO4Q6EEV6 95 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 AMN1Q8IY45 258 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.65
LINC00517-202ENST00000554257 RAB5AP20339 215 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 KCNIP4Q6PIL6 250 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 Q6ZTC4 211 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 FAM210BQ96KR6 192 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 TRGV1A0A0A0MS02 117 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 GAGE12BA1L429 117 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 SNURFLB1AK76 121 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 CIDEAO60543 219 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 GAGE7O76087 117 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 GAGE12FP0CL80 117 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 GAGE12GP0CL81 117 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 GAGE12IP0CL82 117 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 CRYBA4P53673 196 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 NANOS2P60321 138 aaKnown RBP4.71□□□□□ -1.66
LINC00517-202ENST00000554257 RIGQ13278 110 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 TWIST1Q15672 202 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 DPH3P1Q9H4G8 78 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 STAB2Q8WWQ8 2551 aa4.71□□□□□ -1.66
LINC00517-202ENST00000554257 A0A087WWL8 130 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 TRBV6-5A0A0K0K1A5 114 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 TEX48A0A1B0GUV7 120 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 KMT2CQ8NEZ4 4911 aaKnown RBP4.7□□□□□ -1.66
LINC00517-202ENST00000554257 TRAV26-2A0A0B4J265 109 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 SPART-AS1P0CW21 52 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 AP1S3Q96PC3 154 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 ALKBH7Q9BT30 221 aaPredicted RBP4.7□□□□□ -1.66
LINC00517-202ENST00000554257 H3BNG1 76 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 P0DMU3 169 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 FAM231AP0DMU4 169 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 FAM231CP0DMU5 169 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 S100A4P26447 101 aaKnown RBP4.7□□□□□ -1.66
LINC00517-202ENST00000554257 RPL32P62910 135 aaKnown RBP4.7□□□□□ -1.66
LINC00517-202ENST00000554257 SPANXN1Q5VSR9 72 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 SYT8Q8NBV8 401 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 NEXN-AS1Q8NBZ9 246 aa4.7□□□□□ -1.66
LINC00517-202ENST00000554257 TRBV6-4A0A1B0GX49 114 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 RPL39LQ96EH5 51 aaKnown RBP4.69□□□□□ -1.66
LINC00517-202ENST00000554257 MRAP2Q96G30 205 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 ZMAT4Q9H898 229 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 TENM2Q9NT68 2774 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 LOC100131303A0A0U1RQF7 123 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 HLA-DQA1P01909 254 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 TRGC1P0CF51 173 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 POLR2KP53803 58 aaKnown RBP4.69□□□□□ -1.66
LINC00517-202ENST00000554257 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 TPPP3Q9BW30 176 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 MRPL18Q9H0U6 180 aaKnown RBP4.69□□□□□ -1.66
LINC00517-202ENST00000554257 SMKR1H3BMG3 65 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 EMP1P54849 157 aa4.69□□□□□ -1.66
LINC00517-202ENST00000554257 RHODO00212 210 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 NPYP01303 97 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 MT-ND6P03923 174 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 S100PP25815 95 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 COX19Q49B96 90 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 D6R8Y8 96 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 K7EQD1 137 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 TRGC2P03986 189 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 CAMPP49913 170 aa4.68□□□□□ -1.66
LINC00517-202ENST00000554257 UBE2D3P61077 147 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms