RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 IGHV3-30-5P0DP03 117 aa13.15□□□□□ -0.3
SYNE3-202ENST00000553340 CKS1BP61024 79 aa13.15□□□□□ -0.3
SYNE3-202ENST00000553340 JPT2Q9H910 190 aa13.15□□□□□ -0.3
SYNE3-202ENST00000553340 CDIP1Q9H305 208 aa13.15□□□□□ -0.3
SYNE3-202ENST00000553340 A0A087WWL8 130 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 SDHAF1A6NFY7 115 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 H3BUA1 57 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 Q6ZS46 218 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 BRI3O95415 125 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 CFC1BP0CG36 223 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 CFC1P0CG37 223 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 TSPEAR-AS2P59090 65 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 ZNF876PQ49A33 203 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 PPDPFLQ8WWR9 84 aa13.14□□□□□ -0.31
SYNE3-202ENST00000553340 TCL1BO95988 128 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 IGHV1-69P01742 117 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 TEN1Q86WV5 123 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 C10orf126Q8N4M7 172 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 PTH2Q96A98 100 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 PF4V1P10720 104 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 BRD3OSQ6XYD6 125 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 ZNRF2Q8NHG8 242 aa13.13□□□□□ -0.31
SYNE3-202ENST00000553340 TRBV27A0A0K0K1C4 114 aa13.12□□□□□ -0.31
SYNE3-202ENST00000553340 DAZ1Q9NQZ3 744 aaKnown RBP13.12□□□□□ -0.31
SYNE3-202ENST00000553340 J3QQQ9 107 aa13.12□□□□□ -0.31
SYNE3-202ENST00000553340 LGALS3P17931 250 aaKnown RBP13.12□□□□□ -0.31
SYNE3-202ENST00000553340 SRD5A1P18405 259 aa13.12□□□□□ -0.31
SYNE3-202ENST00000553340 PRO1854Q9UHT4 67 aa13.12□□□□□ -0.31
SYNE3-202ENST00000553340 TRBV6-5A0A0K0K1A5 114 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 IGHG2P01859 326 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 VCX2Q9H322 139 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 LGALS9O00182 355 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 SPINK8P0C7L1 97 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 SCGB1C2P0DMR2 95 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 ID1P41134 155 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 CRYBA4P53673 196 aa13.11□□□□□ -0.31
SYNE3-202ENST00000553340 A8MWV9 139 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 LY6EQ16553 131 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 FAM74A4Q5TZK3 123 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 SBSPONQ8IVN8 264 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 CARD19Q96LW7 228 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 AMELXQ99217 191 aa13.1□□□□□ -0.31
SYNE3-202ENST00000553340 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
SYNE3-202ENST00000553340 FHL3Q13643 280 aa13.09□□□□□ -0.31
SYNE3-202ENST00000553340 WFDC12Q8WWY7 111 aa13.09□□□□□ -0.31
SYNE3-202ENST00000553340 Q6ZUT4 128 aa13.09□□□□□ -0.31
SYNE3-202ENST00000553340 MUC6Q6W4X9 2439 aa13.08□□□□□ -0.32
SYNE3-202ENST00000553340 UCNP55089 124 aa13.08□□□□□ -0.32
SYNE3-202ENST00000553340 TGFAP01135 160 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 MT-ATP8P03928 68 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 ZNF56Q15929 161 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 H3BUX3 64 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 XGP55808 180 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 RHOHQ15669 191 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 NSUN5P1Q3KNT7 163 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 DCANP1Q8TF63 244 aa13.07□□□□□ -0.32
SYNE3-202ENST00000553340 LEPROTO15243 131 aa13.06□□□□□ -0.32
SYNE3-202ENST00000553340 C9orf85Q96MD7 179 aa13.06□□□□□ -0.32
SYNE3-202ENST00000553340 GEMIN7Q9H840 131 aaKnown RBP13.06□□□□□ -0.32
SYNE3-202ENST00000553340 IGHV3-16A0A0C4DH30 117 aa13.06□□□□□ -0.32
SYNE3-202ENST00000553340 K7EMT4 169 aa13.06□□□□□ -0.32
SYNE3-202ENST00000553340 M0QY20 66 aa13.06□□□□□ -0.32
SYNE3-202ENST00000553340 BLCAPP62952 87 aa13.06□□□□□ -0.32
SYNE3-202ENST00000553340 TMEM223A0PJW6 202 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 A4D1N5 150 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 IGLV1-40P01703 118 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 ZNF688P0C7X2 276 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 ANKRD29Q8N6D5 301 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 AKAP6Q13023 2319 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 A6NDX4 124 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 EDN2P20800 178 aa13.05□□□□□ -0.32
SYNE3-202ENST00000553340 OPRPNQ99935 248 aaPredicted RBP13.05□□□□□ -0.32
SYNE3-202ENST00000553340 COL6A6A6NMZ7 2263 aa13.04□□□□□ -0.32
SYNE3-202ENST00000553340 TRPT1Q86TN4 253 aaKnown RBP13.04□□□□□ -0.32
SYNE3-202ENST00000553340 RAX2Q96IS3 184 aa13.04□□□□□ -0.32
SYNE3-202ENST00000553340 MDFICQ9P1T7 246 aa13.04□□□□□ -0.32
SYNE3-202ENST00000553340 IGHV4-38-2P0DP08 117 aa13.04□□□□□ -0.32
SYNE3-202ENST00000553340 ATRXP46100 2492 aa13.03□□□□□ -0.32
SYNE3-202ENST00000553340 IGHV4-39P01824 125 aa13.03□□□□□ -0.32
SYNE3-202ENST00000553340 ODF3Q96PU9 254 aa13.03□□□□□ -0.32
SYNE3-202ENST00000553340 ERG28Q9UKR5 140 aa13.03□□□□□ -0.32
SYNE3-202ENST00000553340 TRAV2A0A0B4J234 112 aa13.02□□□□□ -0.32
SYNE3-202ENST00000553340 SLC25A20O43772 301 aa13.02□□□□□ -0.32
SYNE3-202ENST00000553340 IGHV3-33P01772 117 aa13.02□□□□□ -0.32
SYNE3-202ENST00000553340 C20orf203Q8NBC4 194 aa13.02□□□□□ -0.32
SYNE3-202ENST00000553340 A0A0B4J2C4 111 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 TMEM262E9PQX1 116 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 RHODO00212 210 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 P0DMU3 169 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 FAM231AP0DMU4 169 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 FAM231CP0DMU5 169 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 Q8N1Y9 231 aa13.02□□□□□ -0.33
SYNE3-202ENST00000553340 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.33
SYNE3-202ENST00000553340 TRAV12-2A0A075B6T6 113 aa13.01□□□□□ -0.33
SYNE3-202ENST00000553340 ZNF22P17026 224 aaPredicted RBP13.01□□□□□ -0.33
SYNE3-202ENST00000553340 ABCA2Q9BZC7 2435 aa13.01□□□□□ -0.33
SYNE3-202ENST00000553340 C9JAW5 83 aa13.01□□□□□ -0.33
SYNE3-202ENST00000553340 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
SYNE3-202ENST00000553340 MUSTN1Q8IVN3 82 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms