RNA–Protein interactions for RNA: ENST00000552127.5

BRF1-220, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 4

Gene BRF1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-220ENST00000552127 ERVFC1-1P60608 527 aa10.4□□□□□ -0.74
BRF1-220ENST00000552127 UFSP1Q6NVU6 142 aa10.4□□□□□ -0.74
BRF1-220ENST00000552127 CDPF1Q6NVV7 123 aa10.4□□□□□ -0.74
BRF1-220ENST00000552127 JPT2Q9H910 190 aa10.4□□□□□ -0.74
BRF1-220ENST00000552127 RHODO00212 210 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 LINC00694P0DN24 101 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 LINC01556Q5JQF7 62 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 OR10J3Q5JRS4 329 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 DMRTA1Q5VZB9 504 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 TCTE3Q8IZS6 198 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 ATP6V0E2Q8NHE4 81 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 SAMD10Q9BYL1 202 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 BOLA1Q9Y3E2 137 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 PHLDA3Q9Y5J5 127 aa10.39□□□□□ -0.75
BRF1-220ENST00000552127 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
BRF1-220ENST00000552127 EREGO14944 169 aa10.38□□□□□ -0.75
BRF1-220ENST00000552127 HAMPP81172 84 aa10.38□□□□□ -0.75
BRF1-220ENST00000552127 LELP1Q5T871 98 aa10.38□□□□□ -0.75
BRF1-220ENST00000552127 EIF5AL1Q6IS14 154 aaKnown RBP10.38□□□□□ -0.75
BRF1-220ENST00000552127 GTSF1LQ9H1H1 148 aa10.38□□□□□ -0.75
BRF1-220ENST00000552127 MANBALQ9NQG1 85 aa10.38□□□□□ -0.75
BRF1-220ENST00000552127 GAGE12JA6NER3 117 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 M0R381 172 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 RAB5CP51148 216 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 GAGE1Q13065 139 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 GAGE4Q13068 117 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 GAGE5Q13069 117 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 FAM74A4Q5TZK3 123 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
BRF1-220ENST00000552127 SFRP2Q96HF1 295 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 MLST8Q9BVC4 326 aa10.37□□□□□ -0.75
BRF1-220ENST00000552127 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
BRF1-220ENST00000552127 CCL20P78556 96 aa10.36□□□□□ -0.75
BRF1-220ENST00000552127 BAGE2Q86Y30 109 aa10.36□□□□□ -0.75
BRF1-220ENST00000552127 GNG13Q9P2W3 67 aa10.36□□□□□ -0.75
BRF1-220ENST00000552127 A0A087WTM6 91 aa10.35□□□□□ -0.75
BRF1-220ENST00000552127 A0A087WWL8 130 aa10.35□□□□□ -0.75
BRF1-220ENST00000552127 CXCL1P09341 107 aa10.35□□□□□ -0.75
BRF1-220ENST00000552127 RPL35P42766 123 aaKnown RBP10.35□□□□□ -0.75
BRF1-220ENST00000552127 RPL19P84098 196 aaKnown RBP10.35□□□□□ -0.75
BRF1-220ENST00000552127 C11orf52Q96A22 123 aa10.35□□□□□ -0.75
BRF1-220ENST00000552127 IBA57-AS1B1ANH7 110 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 TEX46H3BTG2 121 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 IGHV3-30P01768 117 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 IGHV3-33P01772 117 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 C1QBP02746 253 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 IGHV3-30-3P0DP02 117 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 IGHV3-30-5P0DP03 117 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 SULT1A2P50226 295 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 PRR27Q6MZM9 219 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 Q6ZNX1 250 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 Q9UF83 564 aa10.34□□□□□ -0.75
BRF1-220ENST00000552127 DERL1Q9BUN8 251 aa10.33□□□□□ -0.76
BRF1-220ENST00000552127 SLC51BQ86UW2 128 aa10.32□□□□□ -0.76
BRF1-220ENST00000552127 OR10AG1Q8NH19 301 aa10.32□□□□□ -0.76
BRF1-220ENST00000552127 A0A087WWC5 75 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 SNAI2O43623 268 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 PSCAO43653 123 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 IFNA1P01562 189 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 LAGE3Q14657 143 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 CENPWQ5EE01 88 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 Q9HAA7 133 aa10.31□□□□□ -0.76
BRF1-220ENST00000552127 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
BRF1-220ENST00000552127 OR5AL1P0C617 328 aa10.3□□□□□ -0.76
BRF1-220ENST00000552127 MEF2BQ02080 365 aaPredicted RBP10.3□□□□□ -0.76
BRF1-220ENST00000552127 AKAP14Q86UN6 197 aa10.3□□□□□ -0.76
BRF1-220ENST00000552127 Q8N3U1 123 aa10.3□□□□□ -0.76
BRF1-220ENST00000552127 SSBP4Q9BWG4 385 aaPredicted RBP10.3□□□□□ -0.76
BRF1-220ENST00000552127 PDE6DO43924 150 aa10.29□□□□□ -0.76
BRF1-220ENST00000552127 BCL2P10415 239 aa10.29□□□□□ -0.76
BRF1-220ENST00000552127 FAT3Q8TDW7 4589 aa10.29□□□□□ -0.76
BRF1-220ENST00000552127 IGLV2-8P01709 118 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 GCSHP23434 173 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 GNG4P50150 75 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 RAB4BP61018 213 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 RPL36AP83881 106 aaKnown RBP10.28□□□□□ -0.76
BRF1-220ENST00000552127 ZNF56Q15929 161 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 SPANXN1Q5VSR9 72 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 C9orf62Q8N4C0 152 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 DEFB104AQ8WTQ1 72 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 RPL36ALQ969Q0 106 aaKnown RBP10.28□□□□□ -0.76
BRF1-220ENST00000552127 SMIM12Q96EX1 92 aa10.28□□□□□ -0.76
BRF1-220ENST00000552127 hCG_2014768A0A024R1R8 64 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 MUC21A0A0G2JKD1 596 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 MUC21A0A140T8X8 626 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 RAB19A4D1S5 217 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 LRCOL1A6NCL2 159 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 UBE2D3P61077 147 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 UBE2D2P62837 147 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 OR10G8Q8NGN5 311 aa10.27□□□□□ -0.77
BRF1-220ENST00000552127 TRBV7-3A0A075B6L6 115 aa10.26□□□□□ -0.77
BRF1-220ENST00000552127 DAZ4Q86SG3 579 aaKnown RBP10.26□□□□□ -0.77
BRF1-220ENST00000552127 AP1S3Q96PC3 154 aa10.26□□□□□ -0.77
BRF1-220ENST00000552127 DAZ3Q9NR90 486 aaKnown RBP10.26□□□□□ -0.77
BRF1-220ENST00000552127 MED9Q9NWA0 146 aa10.26□□□□□ -0.77
BRF1-220ENST00000552127 VAX2Q9UIW0 290 aa10.26□□□□□ -0.77
BRF1-220ENST00000552127 TRBV20OR9-2A0A075B6H5 130 aa10.25□□□□□ -0.77
BRF1-220ENST00000552127 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms