RNA–Protein interactions for RNA: ENST00000551079.1

GPN3-209, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 833 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-209ENST00000551079 DEGS1O15121 323 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 CCL3L1P16619 93 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 CMPK1P30085 196 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 LSM3P62310 102 aaKnown RBP-0.29□□□□□ -2.46
GPN3-209ENST00000551079 RPS28P62857 69 aaKnown RBP-0.29□□□□□ -2.46
GPN3-209ENST00000551079 SMIM15Q7Z3B0 74 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 C20orf197Q8N268 126 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 DYNLRB2Q8TF09 96 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 PPDPFLQ8WWR9 84 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 MRPL40Q9NQ50 206 aaKnown RBP-0.29□□□□□ -2.46
GPN3-209ENST00000551079 COA4Q9NYJ1 87 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 BET1LQ9NYM9 111 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 TAS2R8Q9NYW2 309 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 U3KQA8 63 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 NSD1Q96L73 2696 aaPredicted RBP-0.29□□□□□ -2.46
GPN3-209ENST00000551079 MYH8P13535 1937 aa-0.29□□□□□ -2.46
GPN3-209ENST00000551079 CDK13Q14004 1512 aaKnown RBP-0.29□□□□□ -2.46
GPN3-209ENST00000551079 CHD6Q8TD26 2715 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 TRAV12-2A0A075B6T6 113 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 TSTD3H0UI37 97 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 COX6A2Q02221 97 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 CYP2G1PQ6ZSU1 146 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 SELENOSQ9BQE4 189 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 BPESC1Q9GZL8 116 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 GOLGA3Q08378 1498 aa-0.3□□□□□ -2.46
GPN3-209ENST00000551079 USF3Q68DE3 2245 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 TRAV12-3A0A0B4J271 114 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 FAM236AA0A1B0GUQ0 79 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 FAM236BA0A1B0GV22 79 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 GNG14A0A1W2PPG7 69 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 TCTE3Q8IZS6 198 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 C4orf33Q8N1A6 199 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 ATP6V0E2Q8NHE4 81 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 SMIM11BQ8TCY0 68 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 C10orf82Q8WW14 230 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 TENM4Q6N022 2769 aa-0.31□□□□□ -2.46
GPN3-209ENST00000551079 MAP1BP46821 2468 aaKnown RBP-0.32□□□□□ -2.46
GPN3-209ENST00000551079 TRGV1A0A0A0MS02 117 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 CLPSL1A2RUU4 121 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 SMIM24O75264 130 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 PITX3O75364 302 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 APOC1P02654 83 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 SCTP09683 121 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 B2MP61769 119 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 LINC01545Q5VT33 79 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 MIC13Q5XKP0 118 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 FAM213BQ8TBF2 198 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 SKA2Q8WVK7 121 aaPredicted RBP-0.32□□□□□ -2.46
GPN3-209ENST00000551079 AIF1LQ9BQI0 150 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 NDUFA12Q9UI09 145 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 KMT2AQ03164 3969 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 PLXNB2O15031 1838 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 STAB1Q9NY15 2570 aa-0.32□□□□□ -2.46
GPN3-209ENST00000551079 IFT172Q9UG01 1749 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 GVINP1Q7Z2Y8 2422 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 HSPG2P98160 4391 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 PTPN13Q12923 2485 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 TRBV7-1A0A0A6YYK4 115 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 G3V318 75 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 J3QLW9 94 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 COX4I1P13073 169 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 ACYP2P14621 99 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 KRTAP6-1Q3LI64 71 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 FAM74A4Q5TZK3 123 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 ATP11AUNQ6ZP68 121 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 Q6ZRX8 168 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 COX7B2Q8TF08 81 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 HSPB11Q9Y547 144 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 CSPG4Q6UVK1 2322 aa-0.33□□□□□ -2.46
GPN3-209ENST00000551079 UHRF1BP1LA0JNW5 1464 aa-0.34□□□□□ -2.46
GPN3-209ENST00000551079 RBAKDNA6NC62 111 aa-0.34□□□□□ -2.46
GPN3-209ENST00000551079 M0R2P5 195 aa-0.34□□□□□ -2.46
GPN3-209ENST00000551079 NEFHP12036 1026 aa-0.34□□□□□ -2.46
GPN3-209ENST00000551079 SPEF2Q9C093 1822 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 RBP4P02753 201 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 IGLC6P0CF74 106 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 HIST1H1AQ02539 215 aaPredicted RBP-0.35□□□□□ -2.47
GPN3-209ENST00000551079 SPCS2Q15005 226 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 SSBP3-AS1Q7Z2R9 100 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 TAC4Q86UU9 113 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 TMEM242Q9NWH2 141 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 TNXBP22105 4242 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 MYCBP2O75592 4640 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 ZMYM4Q5VZL5 1548 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 VWFP04275 2813 aa-0.35□□□□□ -2.47
GPN3-209ENST00000551079 ADGRB1O14514 1584 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 ZNF236Q9UL36 1845 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.36□□□□□ -2.47
GPN3-209ENST00000551079 BORCS7-ASMTA0A0B4J1R7 106 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 TRAV2A0A0B4J234 112 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 ZNF815PA8K554 130 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 MCRIP1C9JLW8 97 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 APODP05090 189 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 LINC00694P0DN24 101 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 LRP2P98164 4655 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 SSBP1Q04837 148 aaKnown RBP-0.36□□□□□ -2.47
GPN3-209ENST00000551079 CCDC153Q494R4 210 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 SLC48A1Q6P1K1 146 aa-0.36□□□□□ -2.47
GPN3-209ENST00000551079 V9GYV3 84 aa-0.36□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms