RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 AP1S3Q96PC3 154 aa15.02■□□□□ -0
NEK3-202ENST00000550841 CNFNQ9BYD5 112 aa15.02■□□□□ -0
NEK3-202ENST00000550841 TENM2Q9NT68 2774 aa15.02□□□□□ -0.01
NEK3-202ENST00000550841 IGHV3-73A0A0B4J1V6 119 aa15.01□□□□□ -0.01
NEK3-202ENST00000550841 CRYGDP07320 174 aa15.01□□□□□ -0.01
NEK3-202ENST00000550841 TRGC1P0CF51 173 aa15.01□□□□□ -0.01
NEK3-202ENST00000550841 ADCYAP1P18509 176 aa15.01□□□□□ -0.01
NEK3-202ENST00000550841 TRBV6-4A0A1B0GX49 114 aa15□□□□□ -0.01
NEK3-202ENST00000550841 HIGD1CA8MV81 97 aa15□□□□□ -0.01
NEK3-202ENST00000550841 NUDT3O95989 172 aa15□□□□□ -0.01
NEK3-202ENST00000550841 TWIST1Q15672 202 aa15□□□□□ -0.01
NEK3-202ENST00000550841 FAM74A4Q5TZK3 123 aa15□□□□□ -0.01
NEK3-202ENST00000550841 UFSP1Q6NVU6 142 aa15□□□□□ -0.01
NEK3-202ENST00000550841 VSIG2Q96IQ7 327 aa15□□□□□ -0.01
NEK3-202ENST00000550841 PRADC1Q9BSG0 188 aa15□□□□□ -0.01
NEK3-202ENST00000550841 SAMD10Q9BYL1 202 aa15□□□□□ -0.01
NEK3-202ENST00000550841 NAT8BQ9UHF3 227 aa15□□□□□ -0.01
NEK3-202ENST00000550841 NACAE9PAV3 2078 aa15□□□□□ -0.01
NEK3-202ENST00000550841 A0A087WWL8 130 aa14.99□□□□□ -0.01
NEK3-202ENST00000550841 RNF212Q495C1 297 aa14.99□□□□□ -0.01
NEK3-202ENST00000550841 C10orf91Q5T1B1 145 aa14.99□□□□□ -0.01
NEK3-202ENST00000550841 SMIM15Q7Z3B0 74 aa14.99□□□□□ -0.01
NEK3-202ENST00000550841 SMIM27A0A1W2PRY6 76 aa14.98□□□□□ -0.01
NEK3-202ENST00000550841 C14orf178Q8N769 122 aaPredicted RBP14.98□□□□□ -0.01
NEK3-202ENST00000550841 MSRB1Q9NZV6 116 aa14.98□□□□□ -0.01
NEK3-202ENST00000550841 ICOSQ9Y6W8 199 aa14.98□□□□□ -0.01
NEK3-202ENST00000550841 DYNC2H1Q8NCM8 4307 aaKnown RBP14.97□□□□□ -0.01
NEK3-202ENST00000550841 A0A1B0GUT8 65 aa14.97□□□□□ -0.01
NEK3-202ENST00000550841 RAB4BP61018 213 aa14.97□□□□□ -0.01
NEK3-202ENST00000550841 RHOHQ15669 191 aa14.97□□□□□ -0.01
NEK3-202ENST00000550841 MRPL23Q16540 153 aaKnown RBP14.97□□□□□ -0.01
NEK3-202ENST00000550841 NDUFA5Q16718 116 aa14.97□□□□□ -0.01
NEK3-202ENST00000550841 SLC25A29Q8N8R3 303 aa14.97□□□□□ -0.01
NEK3-202ENST00000550841 CARHSP1Q9Y2V2 147 aaKnown RBP14.97□□□□□ -0.01
NEK3-202ENST00000550841 RYR2Q92736 4967 aa14.97□□□□□ -0.01
NEK3-202ENST00000550841 RIGQ13278 110 aa14.96□□□□□ -0.01
NEK3-202ENST00000550841 NUP35Q8NFH5 326 aa14.96□□□□□ -0.01
NEK3-202ENST00000550841 P0DMU3 169 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 FAM231AP0DMU4 169 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 FAM231CP0DMU5 169 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 GYPEP15421 78 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 SH2D6Q7Z4S9 175 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 CTDSP1Q9GZU7 261 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 CSMD3Q7Z407 3707 aa14.95□□□□□ -0.02
NEK3-202ENST00000550841 F5H697 171 aa14.94□□□□□ -0.02
NEK3-202ENST00000550841 ZNF56Q15929 161 aa14.94□□□□□ -0.02
NEK3-202ENST00000550841 LGALS9CQ6DKI2 356 aa14.94□□□□□ -0.02
NEK3-202ENST00000550841 DPH3P1Q9H4G8 78 aa14.94□□□□□ -0.02
NEK3-202ENST00000550841 KIF25-AS1Q9Y6Z4 181 aa14.94□□□□□ -0.02
NEK3-202ENST00000550841 STARD9Q9P2P6 4700 aa14.93□□□□□ -0.02
NEK3-202ENST00000550841 A0A096LPF7 62 aa14.93□□□□□ -0.02
NEK3-202ENST00000550841 K7EQD1 137 aa14.93□□□□□ -0.02
NEK3-202ENST00000550841 EVI2AP22794 236 aa14.93□□□□□ -0.02
NEK3-202ENST00000550841 Q6ZSN1 163 aa14.93□□□□□ -0.02
NEK3-202ENST00000550841 A0A1B0GW15 77 aa14.92□□□□□ -0.02
NEK3-202ENST00000550841 SRIP30626 198 aa14.92□□□□□ -0.02
NEK3-202ENST00000550841 SACSQ9NZJ4 4579 aa14.92□□□□□ -0.02
NEK3-202ENST00000550841 TRBV10-1A0A0K0K1A3 114 aa14.91□□□□□ -0.02
NEK3-202ENST00000550841 CCL18P55774 89 aa14.91□□□□□ -0.02
NEK3-202ENST00000550841 NEGR1Q7Z3B1 354 aa14.91□□□□□ -0.02
NEK3-202ENST00000550841 H7C1H1 209 aa14.9□□□□□ -0.02
NEK3-202ENST00000550841 MGPP08493 103 aa14.9□□□□□ -0.02
NEK3-202ENST00000550841 LINC00315P59091 139 aa14.9□□□□□ -0.02
NEK3-202ENST00000550841 IMMP2LQ96T52 175 aa14.9□□□□□ -0.02
NEK3-202ENST00000550841 LY6G6CO95867 125 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 APOC3P02656 99 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 S100A8P05109 93 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 RHEBQ15382 184 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 UBE2DNLQ8IWF7 75 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 CLRN3Q8NCR9 226 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 LINC00476Q8WZB0 136 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 TMEM242Q9NWH2 141 aa14.89□□□□□ -0.03
NEK3-202ENST00000550841 SLC7A5P1Q8MH63 180 aa14.88□□□□□ -0.03
NEK3-202ENST00000550841 SVBPQ8N300 66 aa14.88□□□□□ -0.03
NEK3-202ENST00000550841 TMEM191AQ9H0A3 160 aa14.88□□□□□ -0.03
NEK3-202ENST00000550841 A0A087WWC5 75 aa14.87□□□□□ -0.03
NEK3-202ENST00000550841 LOC100131303A0A0U1RQF7 123 aa14.87□□□□□ -0.03
NEK3-202ENST00000550841 C7orf77A4D0Y5 90 aa14.87□□□□□ -0.03
NEK3-202ENST00000550841 SNAPINO95295 136 aa14.87□□□□□ -0.03
NEK3-202ENST00000550841 FAM3BP58499 235 aaPredicted RBP14.87□□□□□ -0.03
NEK3-202ENST00000550841 RPL36AP83881 106 aaKnown RBP14.87□□□□□ -0.03
NEK3-202ENST00000550841 RPL36ALQ969Q0 106 aaKnown RBP14.87□□□□□ -0.03
NEK3-202ENST00000550841 KCNIP4Q6PIL6 250 aa14.86□□□□□ -0.03
NEK3-202ENST00000550841 ATP5L2Q7Z4Y8 100 aa14.86□□□□□ -0.03
NEK3-202ENST00000550841 FRZBQ92765 325 aa14.86□□□□□ -0.03
NEK3-202ENST00000550841 GAGE12JA6NER3 117 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 GAGE1Q13065 139 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 GAGE4Q13068 117 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 GAGE5Q13069 117 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 ESRGQ1W209 222 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 GAGE13Q4V321 117 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 ATP6V0E2Q8NHE4 81 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 BTF3L4Q96K17 158 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 RPS10P5Q9NQ39 176 aa14.85□□□□□ -0.03
NEK3-202ENST00000550841 TRBV7-3A0A075B6L6 115 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 S100PP25815 95 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 HBBP68871 147 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 SUMO4Q6EEV6 95 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 LYPD5Q6UWN5 251 aa14.84□□□□□ -0.03
NEK3-202ENST00000550841 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms