RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 NTF3P20783 257 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 S100A4P26447 101 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 CACNG7P62955 275 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 HBBP68871 147 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 RBMY1FQ15415 496 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 MRPL54Q6P161 138 aaKnown RBP4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 ZNF493Q6ZR52 646 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 KIR2DL5AQ8N109 375 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 C1orf158Q8N1D5 194 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 CSNK1G2-AS1Q8NCQ2 148 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 KIR2DL5BQ8NHK3 375 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 LINC01587Q99440 93 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 SCRT2Q9NQ03 307 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 TRAPPC1Q9Y5R8 145 aa4.45□□□□□ -1.7
DEPDC4-209ENST00000550587 MUC4Q99102 2169 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 DNAH9Q9NYC9 4486 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 LOC102724200A0A096LPH7 203 aaPredicted RBP4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 IGHV3-16A0A0C4DH30 117 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 H3BVH4 76 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 UBE2CO00762 179 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 PHOX2AO14813 284 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 TRGC2P03986 189 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 CAMPP49913 170 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 APOC4P55056 127 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 RAB4BP61018 213 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 FABP9Q0Z7S8 132 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 TWIST1Q15672 202 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 TMEM136Q6ZRR5 245 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 GATD1Q8NB37 220 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 TMEM208Q9BTX3 173 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 TPPP3Q9BW30 176 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 RETNQ9HD89 108 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 GOLT1BQ9Y3E0 138 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 PHLDA3Q9Y5J5 127 aa4.44□□□□□ -1.7
DEPDC4-209ENST00000550587 MUC21A0A0G2JKD1 596 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 MUC21A0A140T8X8 626 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 CBY3A6NI87 242 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 SNURFLB1AK76 121 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 NXPH4O95158 308 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 APCSP02743 223 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 RAB5BP61020 215 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 SPANXN1Q5VSR9 72 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 ZNF705AQ6ZN79 300 aaPredicted RBP4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 OR10AG1Q8NH19 301 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 FRZBQ92765 325 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 PTH2Q96A98 100 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 C9orf85Q96MD7 179 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 SPXQ9BT56 116 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 TMEM191AQ9H0A3 160 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 MSRB1Q9NZV6 116 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 MDFICQ9P1T7 246 aa4.43□□□□□ -1.7
DEPDC4-209ENST00000550587 RYR1P21817 5038 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 SMIM9A6NGZ8 99 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 TRGC1P0CF51 173 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 GYPEP15421 78 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 HTN1P15515 57 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 SSTP61278 116 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 SLAQ13239 276 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 C21orf62-AS1Q17RA5 79 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 PIK3CD-AS1Q5SR53 167 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 FAM104BQ5XKR9 115 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 Q6ZWC4 215 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 SMIM15Q7Z3B0 74 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 ZFP82Q8N141 532 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 LINC00476Q8WZB0 136 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 TP53TG1Q9Y2A0 90 aa4.42□□□□□ -1.7
DEPDC4-209ENST00000550587 HERC2O95714 4834 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 IGHV3OR16-12A0A075B7B8 117 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 M0R2P5 195 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 M0R381 172 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 SPRY2O43597 315 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BKO60814 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 PRM2P04554 102 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BJP06899 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 AZU1P20160 251 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 RAB4AP20338 218 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 EVI2AP22794 236 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BOP23527 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BBP33778 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BDP58876 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BCP62807 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 ZNF415Q09FC8 603 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST2H2BEQ16778 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 RRN3P1Q2M238 152 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 ZNF876PQ49A33 203 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 CEMP1Q6PRD7 247 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 C11orf72Q8NBR9 251 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 RNASE8Q8TDE3 154 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BHQ93079 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BNQ99877 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 HIST1H2BMQ99879 126 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 NDUFAF3Q9BU61 184 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 TIMM8BQ9Y5J9 83 aaPredicted RBP4.41□□□□□ -1.7
DEPDC4-209ENST00000550587 A0A0J9YWU9 116 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 PPBPP02775 128 aa4.4□□□□□ -1.71
DEPDC4-209ENST00000550587 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms