RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 IGIPA6NJ69 53 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 SOCS3O14543 225 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 CFC1BP0CG36 223 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 CFC1P0CG37 223 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 ARL3P36405 182 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 HERVK_113P61574 105 aa10.33□□□□□ -0.76
HDAC7-228ENST00000548938 MUC4Q99102 2169 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 OVOL1O14753 267 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 IGHV3-30P01768 117 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 IGHV3-30-5P0DP03 117 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 LYRM7Q5U5X0 104 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 C5orf56Q8N8D9 126 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 IGKV3-7A0A075B6H7 116 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 LINC00315P59091 139 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 PMVKQ15126 192 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 JPT2Q9H910 190 aa10.32□□□□□ -0.76
HDAC7-228ENST00000548938 CELSR1Q9NYQ6 3014 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 MAP1AP78559 2803 aaPredicted RBP10.31□□□□□ -0.76
HDAC7-228ENST00000548938 FLNCQ14315 2725 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 TMEM170BQ5T4T1 132 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 KIF25-AS1Q9Y6Z4 181 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 TRAV41A0A0B4J266 112 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 IGHV1-69DA0A0B4J2H0 117 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 PPP1R17O96001 155 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 RPL11P62913 178 aaKnown RBP10.31□□□□□ -0.76
HDAC7-228ENST00000548938 FAM19A4Q96LR4 140 aa10.31□□□□□ -0.76
HDAC7-228ENST00000548938 C10orf126Q8N4M7 172 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 ZNRF2Q8NHG8 242 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 KIR2DL4Q99706 377 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 PAPPA-AS1Q5QFB9 102 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 SUMO4Q6EEV6 95 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 ANKRD29Q8N6D5 301 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 POM121L12Q8N7R1 296 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 SLC25A29Q8N8R3 303 aa10.3□□□□□ -0.76
HDAC7-228ENST00000548938 A0A087WWL8 130 aa10.29□□□□□ -0.76
HDAC7-228ENST00000548938 A8MWV9 139 aa10.29□□□□□ -0.76
HDAC7-228ENST00000548938 NXPH4O95158 308 aa10.29□□□□□ -0.76
HDAC7-228ENST00000548938 SBSPONQ8IVN8 264 aa10.29□□□□□ -0.76
HDAC7-228ENST00000548938 AMELXQ99217 191 aa10.29□□□□□ -0.76
HDAC7-228ENST00000548938 USP9XQ93008 2570 aaPredicted RBP10.29□□□□□ -0.76
HDAC7-228ENST00000548938 POLR2KP53803 58 aaKnown RBP10.29□□□□□ -0.76
HDAC7-228ENST00000548938 UBTD1Q9HAC8 227 aa10.29□□□□□ -0.76
HDAC7-228ENST00000548938 TRBV20-1A0A075B6N2 111 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 IGHV4OR15-8A0A075B7B6 117 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 A0A087WW49 117 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 FAM223BA6NKX1 122 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 NPFFO15130 113 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 SCGB1C2P0DMR2 95 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 APRG1Q8IVJ8 170 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 FAM223AQ8IWN6 122 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 MYO18BQ8IUG5 2567 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 DOPEY1Q5JWR5 2465 aa10.28□□□□□ -0.76
HDAC7-228ENST00000548938 PRO1854Q9UHT4 67 aa10.27□□□□□ -0.76
HDAC7-228ENST00000548938 IGHV3OR16-10A0A075B7F0 116 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 J3QQQ9 107 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 IGHV3-11P01762 117 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 ZNF688P0C7X2 276 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 RPL32P62910 135 aaKnown RBP10.27□□□□□ -0.77
HDAC7-228ENST00000548938 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 TIMM17AQ99595 171 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 SDHAF1A6NFY7 115 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 F5H697 171 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 EIF4EBP3O60516 100 aaPredicted RBP10.27□□□□□ -0.77
HDAC7-228ENST00000548938 ZNF876PQ49A33 203 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 RAX2Q96IS3 184 aa10.27□□□□□ -0.77
HDAC7-228ENST00000548938 EPG5Q9HCE0 2579 aa10.26□□□□□ -0.77
HDAC7-228ENST00000548938 NDUFA4O00483 81 aa10.26□□□□□ -0.77
HDAC7-228ENST00000548938 VCYO14598 125 aa10.26□□□□□ -0.77
HDAC7-228ENST00000548938 LGALS3P17931 250 aaKnown RBP10.26□□□□□ -0.77
HDAC7-228ENST00000548938 SRD5A1P18405 259 aa10.26□□□□□ -0.77
HDAC7-228ENST00000548938 CRIP2P52943 208 aaPredicted RBP10.26□□□□□ -0.77
HDAC7-228ENST00000548938 OPRPNQ99935 248 aaPredicted RBP10.26□□□□□ -0.77
HDAC7-228ENST00000548938 MOB4Q9Y3A3 225 aa10.26□□□□□ -0.77
HDAC7-228ENST00000548938 A4D1N5 150 aa10.25□□□□□ -0.77
HDAC7-228ENST00000548938 RNF183Q96D59 192 aa10.25□□□□□ -0.77
HDAC7-228ENST00000548938 ZNF256Q9Y2P7 627 aaPredicted RBP10.25□□□□□ -0.77
HDAC7-228ENST00000548938 H7C2G1 150 aa10.25□□□□□ -0.77
HDAC7-228ENST00000548938 FAM74A4Q5TZK3 123 aa10.25□□□□□ -0.77
HDAC7-228ENST00000548938 TRPT1Q86TN4 253 aaKnown RBP10.25□□□□□ -0.77
HDAC7-228ENST00000548938 ZNF462Q96JM2 2506 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 C9JAW5 83 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 SLC25A20O43772 301 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 GATA3P23771 443 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 FAM159AQ6UWV7 190 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 IGHV3-64A0A075B6Q5 118 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 ERG28Q9UKR5 140 aa10.24□□□□□ -0.77
HDAC7-228ENST00000548938 TRBV27A0A0K0K1C4 114 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 KLLNB2CW77 178 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 PRB1P04280 392 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 LMO4P61968 165 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 RHPN1-AS1Q9BWJ2 59 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 BPESC1Q9GZL8 116 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 VCX2Q9H322 139 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 IGHV3-33P01772 117 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 EDN2P20800 178 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 SPG11Q96JI7 2443 aa10.23□□□□□ -0.77
HDAC7-228ENST00000548938 TRAV2A0A0B4J234 112 aa10.22□□□□□ -0.77
HDAC7-228ENST00000548938 TRAV12-3A0A0B4J271 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms