RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 MUC21A0A0G2JKD1 596 aa8.09□□□□□ -1.11
RAB5C-204ENST00000547517 MUC21A0A140T8X8 626 aa8.09□□□□□ -1.11
RAB5C-204ENST00000547517 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
RAB5C-204ENST00000547517 UFSP1Q6NVU6 142 aa8.09□□□□□ -1.11
RAB5C-204ENST00000547517 DAZAP1Q96EP5 407 aaKnown RBP8.09□□□□□ -1.11
RAB5C-204ENST00000547517 SFRP2Q96HF1 295 aa8.09□□□□□ -1.11
RAB5C-204ENST00000547517 A0A1B0GVY2 172 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 GAGE12JA6NER3 117 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 RBFOX3A6NFN3 312 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 SNAI2O43623 268 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 GZMBP10144 247 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 GAGE1Q13065 139 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 GAGE4Q13068 117 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 GAGE5Q13069 117 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 GAGE13Q4V321 117 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 SPANXN1Q5VSR9 72 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 C14orf178Q8N769 122 aaPredicted RBP8.08□□□□□ -1.12
RAB5C-204ENST00000547517 OR2D3Q8NGH3 330 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 LYPD6BQ8NI32 183 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 TPPP3Q9BW30 176 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
RAB5C-204ENST00000547517 C19orf71A6NCJ1 209 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 P01737 135 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 OR5AL1P0C617 328 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 CEBPGP53567 150 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 LINC00315P59091 139 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 SSTP61278 116 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 TNP2Q05952 138 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 TMA7Q9Y2S6 64 aaKnown RBP8.07□□□□□ -1.12
RAB5C-204ENST00000547517 LY96Q9Y6Y9 160 aa8.07□□□□□ -1.12
RAB5C-204ENST00000547517 PKHD1P08F94 4074 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 TMEM250H0YL14 139 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 CRYGDP07320 174 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 LINC00694P0DN24 101 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 TIRAPP58753 221 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 RPS20P60866 119 aaKnown RBP8.06□□□□□ -1.12
RAB5C-204ENST00000547517 ZNF56Q15929 161 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 FER1L6-AS1Q8NA97 138 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 ATP6V0E2Q8NHE4 81 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 SSBP4Q9BWG4 385 aaPredicted RBP8.06□□□□□ -1.12
RAB5C-204ENST00000547517 EIF5A2Q9GZV4 153 aaKnown RBP8.06□□□□□ -1.12
RAB5C-204ENST00000547517 BIN3Q9NQY0 253 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 Q9UF83 564 aa8.06□□□□□ -1.12
RAB5C-204ENST00000547517 DYNC1H1Q14204 4646 aaKnown RBP8.06□□□□□ -1.12
RAB5C-204ENST00000547517 K7EN84 100 aa8.05□□□□□ -1.12
RAB5C-204ENST00000547517 DNAH10OSP0CZ25 163 aa8.05□□□□□ -1.12
RAB5C-204ENST00000547517 OR10J3Q5JRS4 329 aa8.05□□□□□ -1.12
RAB5C-204ENST00000547517 SVBPQ8N300 66 aa8.05□□□□□ -1.12
RAB5C-204ENST00000547517 GTSF1LQ9H1H1 148 aa8.05□□□□□ -1.12
RAB5C-204ENST00000547517 PKD1P98161 4303 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 TRAV8-6A0A0B4J262 113 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 XKRY2A2RUG3 117 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 EVI2AP22794 236 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 LELP1Q5T871 98 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 AP1S3Q96PC3 154 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 RNASE7Q9H1E1 156 aaKnown RBP8.04□□□□□ -1.12
RAB5C-204ENST00000547517 DNAH11Q96DT5 4516 aa8.04□□□□□ -1.12
RAB5C-204ENST00000547517 TRAV9-2A0A087WT02 112 aa8.03□□□□□ -1.12
RAB5C-204ENST00000547517 IGHV3-38A0A0C4DH36 116 aa8.03□□□□□ -1.12
RAB5C-204ENST00000547517 BTF3P20290 206 aaKnown RBP8.03□□□□□ -1.12
RAB5C-204ENST00000547517 NUDT10Q8NFP7 164 aa8.03□□□□□ -1.12
RAB5C-204ENST00000547517 OCC1Q8TAD7 63 aa8.03□□□□□ -1.12
RAB5C-204ENST00000547517 NUDT11Q96G61 164 aa8.03□□□□□ -1.12
RAB5C-204ENST00000547517 RPP21Q9H633 154 aaKnown RBP8.03□□□□□ -1.12
RAB5C-204ENST00000547517 TRBV10-1A0A0K0K1A3 114 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 SNAPINO95295 136 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 MGPP08493 103 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 SMIM17P0DL12 118 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 RAB4BP61018 213 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 SMIM7Q9BQ49 75 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 TNFRSF18Q9Y5U5 241 aa8.02□□□□□ -1.13
RAB5C-204ENST00000547517 F5H697 171 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 IGHV3-30P01768 117 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 IGHV3-33P01772 117 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 APOC3P02656 99 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 IGHV3-30-3P0DP02 117 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 IGHV3-30-5P0DP03 117 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 CTRLP40313 264 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 CACNG7P62955 275 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 RPL36AP83881 106 aaKnown RBP8.01□□□□□ -1.13
RAB5C-204ENST00000547517 LINC01556Q5JQF7 62 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 LYZL1Q6UWQ5 148 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 Q6ZRN7 208 aaPredicted RBP8.01□□□□□ -1.13
RAB5C-204ENST00000547517 C10orf126Q8N4M7 172 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 RPL36ALQ969Q0 106 aaKnown RBP8.01□□□□□ -1.13
RAB5C-204ENST00000547517 MSRB1Q9NZV6 116 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 CARHSP1Q9Y2V2 147 aaKnown RBP8.01□□□□□ -1.13
RAB5C-204ENST00000547517 RYR1P21817 5038 aa8.01□□□□□ -1.13
RAB5C-204ENST00000547517 TRBV7-3A0A075B6L6 115 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 TMEM218A2RU14 115 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 F2Z2F3 143 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 K7EP13 123 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 SRP19P09132 144 aaKnown RBP8□□□□□ -1.13
RAB5C-204ENST00000547517 Q8N3U1 123 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 NEXN-AS1Q8NBZ9 246 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 SEC11CQ9BY50 192 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 SMDT1Q9H4I9 107 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 KIF25-AS1Q9Y6Z4 181 aa8□□□□□ -1.13
RAB5C-204ENST00000547517 HERC2O95714 4834 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms