RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 ZFP82Q8N141 532 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 FAM213BQ8TBF2 198 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 SFRP2Q96HF1 295 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 ZNF471Q9BX82 626 aaPredicted RBP6.28□□□□□ -1.4
YBX3-218ENST00000546298 SAMD10Q9BYL1 202 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 JPT2Q9H910 190 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 DNAH17Q9UFH2 4485 aa6.28□□□□□ -1.4
YBX3-218ENST00000546298 TMSB15BA0A087X1C1 80 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 LRCOL1A6NCL2 159 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 M0R381 172 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 BCL2L11O43521 198 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 H2AFB1P0C5Y9 115 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 LINC00694P0DN24 101 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 KRTAP10-1P60331 282 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 BAGE2Q86Y30 109 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 RMI2Q96E14 147 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 COX11Q9Y6N1 276 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 URGCP-MRPS24S4R325 110 aa6.27□□□□□ -1.41
YBX3-218ENST00000546298 A0A087WWL8 130 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 TRBV10-1A0A0K0K1A3 114 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 XGP55808 180 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 RPL36AP83881 106 aaKnown RBP6.26□□□□□ -1.41
YBX3-218ENST00000546298 ELOBQ15370 118 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 KCNIP4Q6PIL6 250 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 C14orf178Q8N769 122 aaPredicted RBP6.26□□□□□ -1.41
YBX3-218ENST00000546298 Q8N814 137 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 FRZBQ92765 325 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 RPL36ALQ969Q0 106 aaKnown RBP6.26□□□□□ -1.41
YBX3-218ENST00000546298 FAT2Q9NYQ8 4349 aa6.26□□□□□ -1.41
YBX3-218ENST00000546298 A0A1B0GV50 99 aa6.25□□□□□ -1.41
YBX3-218ENST00000546298 CXCL1P09341 107 aa6.25□□□□□ -1.41
YBX3-218ENST00000546298 EIF5AL1Q6IS14 154 aaKnown RBP6.25□□□□□ -1.41
YBX3-218ENST00000546298 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.25□□□□□ -1.41
YBX3-218ENST00000546298 TMEM70Q9BUB7 260 aa6.25□□□□□ -1.41
YBX3-218ENST00000546298 CHCHD7Q9BUK0 85 aa6.25□□□□□ -1.41
YBX3-218ENST00000546298 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
YBX3-218ENST00000546298 TRBV7-3A0A075B6L6 115 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 SCO2A0A1W2PP80 73 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 TEX46H3BTG2 121 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 RAB5CP51148 216 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 RAB4BP61018 213 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 TMUB2Q71RG4 321 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 DAZ4Q86SG3 579 aaKnown RBP6.24□□□□□ -1.41
YBX3-218ENST00000546298 NIT1Q86X76 327 aa6.24□□□□□ -1.41
YBX3-218ENST00000546298 DAZ3Q9NR90 486 aaKnown RBP6.24□□□□□ -1.41
YBX3-218ENST00000546298 RYR1P21817 5038 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 A0A087WX48 190 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 TRAV1-1A0A0B4J248 108 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 C1QBP02746 253 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 OR5AL1P0C617 328 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 SPANXN1Q5VSR9 72 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 OR10G8Q8NGN5 311 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 MLST8Q9BVC4 326 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 SSBP4Q9BWG4 385 aaPredicted RBP6.23□□□□□ -1.41
YBX3-218ENST00000546298 MANBALQ9NQG1 85 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 Q9UF83 564 aa6.23□□□□□ -1.41
YBX3-218ENST00000546298 DYNC1H1Q14204 4646 aaKnown RBP6.22□□□□□ -1.41
YBX3-218ENST00000546298 F5H697 171 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 FAM229AH3BQW9 127 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 SNAI2O43623 268 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 INAFM2P0DMQ5 153 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 UBE2D3P61077 147 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 PKIAP61925 76 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 UBE2D2P62837 147 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 ZNF56Q15929 161 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 Q5VSD8 79 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 PRR27Q6MZM9 219 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 Q8N3U1 123 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 OR10AG1Q8NH19 301 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 DAZAP1Q96EP5 407 aaKnown RBP6.22□□□□□ -1.41
YBX3-218ENST00000546298 KLK12Q9UKR0 248 aa6.22□□□□□ -1.41
YBX3-218ENST00000546298 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.41
YBX3-218ENST00000546298 IGKV2D-24A0A075B6R9 120 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 TMEM262E9PQX1 116 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 SMIM17P0DL12 118 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 RPL35P42766 123 aaKnown RBP6.21□□□□□ -1.42
YBX3-218ENST00000546298 RPS20P60866 119 aaKnown RBP6.21□□□□□ -1.42
YBX3-218ENST00000546298 RPL19P84098 196 aaKnown RBP6.21□□□□□ -1.42
YBX3-218ENST00000546298 Q0VG73 95 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 TMEM97Q5BJF2 176 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 Q8N976 141 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 C11orf52Q96A22 123 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 UBE2WQ96B02 151 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 GNG13Q9P2W3 67 aa6.21□□□□□ -1.42
YBX3-218ENST00000546298 PKHD1P08F94 4074 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 TRBV6-8A0A0A6YYG3 113 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 RBFOX3A6NFN3 312 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 IFNA1P01562 189 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 SMR3BP02814 79 aaPredicted RBP6.2□□□□□ -1.42
YBX3-218ENST00000546298 BAALCQ8WXS3 180 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 SMIM12Q96EX1 92 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 AP1S3Q96PC3 154 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 BIN3Q9NQY0 253 aa6.2□□□□□ -1.42
YBX3-218ENST00000546298 MUC21A0A0G2JKD1 596 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 MUC21A0A140T8X8 626 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 XKRY2A2RUG3 117 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 LECT2O14960 151 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 PDE6DO43924 150 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 CRPP02741 224 aa6.19□□□□□ -1.42
YBX3-218ENST00000546298 CCL20P78556 96 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms