RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 METTL1Q9UBP6 276 aaKnown RBP2.03□□□□□ -2.08
SNHG1-222ENST00000545308 JPT1Q9UK76 154 aa2.03□□□□□ -2.08
SNHG1-222ENST00000545308 VPS13DQ5THJ4 4388 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 A6NIN4 97 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF736B4DX44 427 aaPredicted RBP2.02□□□□□ -2.09
SNHG1-222ENST00000545308 C9JCJ5 164 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 AIPO00170 330 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 CRYZL1O95825 349 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 CTSGP08311 255 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF705DP0CH99 300 aaPredicted RBP2.02□□□□□ -2.09
SNHG1-222ENST00000545308 SPART-AS1P0CW21 52 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 HLA-DMBP28068 263 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 CCL18P55774 89 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 TAS2R30P59541 319 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 PMAIP1Q13794 54 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 KISS1Q15726 138 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 ANKRD29Q8N6D5 301 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 OR51A2Q8NGJ7 313 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 DEFB104AQ8WTQ1 72 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 CNBD2Q96M20 576 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 AMELYQ99218 206 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 AK3Q9UIJ7 227 aa2.02□□□□□ -2.09
SNHG1-222ENST00000545308 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 FLG2Q5D862 2391 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-222ENST00000545308 A0A1B0GW64 132 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 SMIM9A6NGZ8 99 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 KNCNA6PVL3 124 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 A8MUN3 132 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 LST1O00453 97 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 OR7C1O76099 320 aaPredicted RBP2.01□□□□□ -2.09
SNHG1-222ENST00000545308 IGKV4-1P06312 121 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 CD2P06729 351 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 DEFA4P12838 97 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 SNRPGP62308 76 aaKnown RBP2.01□□□□□ -2.09
SNHG1-222ENST00000545308 RPL30P62888 115 aaKnown RBP2.01□□□□□ -2.09
SNHG1-222ENST00000545308 RHOGP84095 191 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 CDK5R1Q15078 307 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 VMA21Q3ZAQ7 101 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 TNFAIP8L3Q5GJ75 292 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 Q5VSD8 79 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF833PQ6ZTB9 187 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 C2orf91Q6ZV80 131 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 TTC9CQ8N5M4 171 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF439Q8NDP4 499 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 OR4X1Q8NH49 305 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 GRPEL2Q8TAA5 225 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 DNAJC9Q8WXX5 260 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 FAM103A1Q9BTL3 118 aaKnown RBP2.01□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM222Q9H0R3 208 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 WFDC10AQ9H1F0 79 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 TMEM14BQ9NUH8 114 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 CMTM6Q9NX76 183 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 PKIGQ9Y2B9 76 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 DNAH2Q9P225 4427 aa2.01□□□□□ -2.09
SNHG1-222ENST00000545308 A0A0G2JND7 137 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 NBDYA0A0U1RRE5 68 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 G3V3Q6 166 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 GNGT2O14610 69 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 HTR1AP08908 422 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 FGF6P10767 208 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 S100A7P31151 101 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 EIF2B2P49770 351 aaKnown RBP2□□□□□ -2.09
SNHG1-222ENST00000545308 HINT1P49773 126 aaPredicted RBP2□□□□□ -2.09
SNHG1-222ENST00000545308 AKR1C1Q04828 323 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 CDK10Q15131 360 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 RTL8BQ17RB0 113 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 ACOT6Q3I5F7 207 aaPredicted RBP2□□□□□ -2.09
SNHG1-222ENST00000545308 LPCAT3Q6P1A2 487 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 ZNF436-AS1Q8NC38 126 aaPredicted RBP2□□□□□ -2.09
SNHG1-222ENST00000545308 VSTM2AQ8TAG5 236 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 SIGMAR1Q99720 223 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 TAF9BQ9HBM6 251 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 ARMC1Q9NVT9 282 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 PRELID1Q9Y255 219 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 SAMHD1Q9Y3Z3 626 aaKnown RBP2□□□□□ -2.09
SNHG1-222ENST00000545308 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 HSPG2P98160 4391 aa2□□□□□ -2.09
SNHG1-222ENST00000545308 TRAV2A0A0B4J234 112 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 IGKV1-9A0A0C4DH69 117 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 A0A1B0GW54 56 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 LOC107986453A0A1B0GWG9 222 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 FXYD1O00168 92 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 NDUFA4O00483 81 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 PLA2G10O15496 165 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 SAA2P0DJI9 122 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-222ENST00000545308 S100A5P33763 92 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 CSN1S1P47710 185 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 RBM11P57052 281 aaKnown RBP1.99□□□□□ -2.09
SNHG1-222ENST00000545308 FXYD7P58549 80 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 PPP3R1P63098 170 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 OR8D4Q8NGM9 314 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 OR4K15Q8NH41 348 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 MCFD2Q8NI22 146 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 BORCS7Q96B45 105 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 ADAT3Q96EY9 351 aaPredicted RBP1.99□□□□□ -2.09
SNHG1-222ENST00000545308 TTTY13Q9BZ97 58 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 CCDC90BQ9GZT6 254 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 ENY2Q9NPA8 101 aa1.99□□□□□ -2.09
SNHG1-222ENST00000545308 TVP23BQ9NYZ1 205 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms