RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 COX6CP09669 75 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 LINC00315P59091 139 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 NRGNQ92686 78 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 DNAJC30Q96LL9 226 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 IGHV3-35A0A0C4DH35 117 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 ZNF56Q15929 161 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 C15orf32Q32M92 178 aa13.74□□□□□ -0.21
CCT4-204ENST00000544079 DSPP15924 2871 aaKnown RBP13.73□□□□□ -0.21
CCT4-204ENST00000544079 TRBV6-5A0A0K0K1A5 114 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 APRG1Q8IVJ8 170 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 CHCHD5Q9BSY4 110 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 SPANXCQ9NY87 97 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 IGHV7-81A0A0B4J1V7 117 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 TRBV27A0A0K0K1C4 114 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 OVOL1O14753 267 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 C16orf92Q96LL3 132 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 ICOSQ9Y6W8 199 aa13.73□□□□□ -0.21
CCT4-204ENST00000544079 M0R1W7 72 aa13.72□□□□□ -0.21
CCT4-204ENST00000544079 RPL39P62891 51 aaKnown RBP13.72□□□□□ -0.21
CCT4-204ENST00000544079 GPR179Q6PRD1 2367 aa13.72□□□□□ -0.21
CCT4-204ENST00000544079 NCOR2Q9Y618 2525 aa13.72□□□□□ -0.21
CCT4-204ENST00000544079 IGHV3-66A0A0C4DH42 116 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 B9A039 149 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 IGFL3Q6UXB1 125 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 E7EQL1 145 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 ATP5G1P05496 136 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 RNASE3P12724 160 aaKnown RBP13.71□□□□□ -0.21
CCT4-204ENST00000544079 RHOHQ15669 191 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 FAM19A4Q96LR4 140 aa13.71□□□□□ -0.21
CCT4-204ENST00000544079 A0A0J9YXY3 114 aa13.7□□□□□ -0.22
CCT4-204ENST00000544079 PPDPFQ9H3Y8 114 aa13.7□□□□□ -0.22
CCT4-204ENST00000544079 LST1O00453 97 aa13.7□□□□□ -0.22
CCT4-204ENST00000544079 CDX4O14627 284 aaPredicted RBP13.7□□□□□ -0.22
CCT4-204ENST00000544079 NSUN5P1Q3KNT7 163 aa13.7□□□□□ -0.22
CCT4-204ENST00000544079 ZNF22P17026 224 aaPredicted RBP13.69□□□□□ -0.22
CCT4-204ENST00000544079 CCDC140Q96MF4 163 aa13.69□□□□□ -0.22
CCT4-204ENST00000544079 BEX4Q9NWD9 120 aaPredicted RBP13.69□□□□□ -0.22
CCT4-204ENST00000544079 TRBV7-1A0A0A6YYK4 115 aa13.68□□□□□ -0.22
CCT4-204ENST00000544079 IGF1P05019 195 aa13.68□□□□□ -0.22
CCT4-204ENST00000544079 SUMO4Q6EEV6 95 aa13.68□□□□□ -0.22
CCT4-204ENST00000544079 EEF1AKMT3Q96AZ1 226 aa13.68□□□□□ -0.22
CCT4-204ENST00000544079 C3orf22Q8N5N4 141 aa13.67□□□□□ -0.22
CCT4-204ENST00000544079 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
CCT4-204ENST00000544079 LITAFQ99732 161 aa13.67□□□□□ -0.22
CCT4-204ENST00000544079 DEFB109BQ30KR1 87 aa13.67□□□□□ -0.22
CCT4-204ENST00000544079 A0A0G2JNJ9 132 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 UQCRQO14949 82 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 SPRY2O43597 315 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 CD3EP07766 207 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 UBE2E1P51965 193 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 PLA2G2CQ5R387 149 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 CLEC19AQ6UXS0 136 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 Q9UFV3 132 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 TRGV11A0A075B6L2 103 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 NDUFA7O95182 113 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 MINOS1Q5TGZ0 78 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 MINOS1-NBL1R4GNA1 71 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 CACNA1BQ00975 2339 aa13.66□□□□□ -0.22
CCT4-204ENST00000544079 IGHV3OR16-13A0A075B7E8 117 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 IGHV3-74A0A0B4J1X5 117 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 LRRC75A-AS1Q8N1F1 130 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 Q8N9W7 124 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 SPTBN2O15020 2390 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 PRRC2CQ9Y520 2896 aaKnown RBP13.65□□□□□ -0.22
CCT4-204ENST00000544079 A0A1B0GX51 115 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 C5orf47Q569G3 176 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 DUX3Q96PT4 197 aa13.65□□□□□ -0.22
CCT4-204ENST00000544079 CSDC2Q9Y534 153 aaKnown RBP13.65□□□□□ -0.22
CCT4-204ENST00000544079 FAM236AA0A1B0GUQ0 79 aa13.64□□□□□ -0.23
CCT4-204ENST00000544079 FAM236BA0A1B0GV22 79 aa13.64□□□□□ -0.23
CCT4-204ENST00000544079 GNRH2O43555 120 aa13.64□□□□□ -0.23
CCT4-204ENST00000544079 RNASE4P34096 147 aaKnown RBP13.64□□□□□ -0.23
CCT4-204ENST00000544079 LINC00526Q96FQ7 95 aa13.64□□□□□ -0.23
CCT4-204ENST00000544079 C9orf153Q5TBE3 101 aa13.64□□□□□ -0.23
CCT4-204ENST00000544079 VMO1Q7Z5L0 202 aa13.64□□□□□ -0.23
CCT4-204ENST00000544079 LYNX1G3V0Z9 82 aa13.63□□□□□ -0.23
CCT4-204ENST00000544079 LYNX1P0DP58 116 aa13.63□□□□□ -0.23
CCT4-204ENST00000544079 LINC00643Q86TS7 51 aa13.63□□□□□ -0.23
CCT4-204ENST00000544079 J3KRW8 73 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 SOCS3O14543 225 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 TPRP12270 2363 aaKnown RBP13.62□□□□□ -0.23
CCT4-204ENST00000544079 EPG5Q9HCE0 2579 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 IGHV3-49A0A0A0MS15 119 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 LINC00694P0DN24 101 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 ID1P41134 155 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 MIAQ16674 131 aa13.62□□□□□ -0.23
CCT4-204ENST00000544079 ZNF256Q9Y2P7 627 aaPredicted RBP13.61□□□□□ -0.23
CCT4-204ENST00000544079 IGHV3-30-3P0DP02 117 aa13.61□□□□□ -0.23
CCT4-204ENST00000544079 CXCL5P42830 114 aa13.61□□□□□ -0.23
CCT4-204ENST00000544079 SDIM1Q6ZPB5 146 aa13.61□□□□□ -0.23
CCT4-204ENST00000544079 ACACBO00763 2458 aa13.6□□□□□ -0.23
CCT4-204ENST00000544079 ECSCRQ19T08 205 aa13.6□□□□□ -0.23
CCT4-204ENST00000544079 C20orf203Q8NBC4 194 aa13.6□□□□□ -0.23
CCT4-204ENST00000544079 J3KT08 172 aa13.6□□□□□ -0.23
CCT4-204ENST00000544079 TIMM21Q9BVV7 248 aa13.6□□□□□ -0.23
CCT4-204ENST00000544079 ZZEF1O43149 2961 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 I3L3M4 83 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 TIMM17BO60830 172 aa13.59□□□□□ -0.23
CCT4-204ENST00000544079 RPS28P62857 69 aaKnown RBP13.59□□□□□ -0.23
CCT4-204ENST00000544079 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms