RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 A0A087WWL8 130 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 TRGV4A0A0C4DH28 118 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 RS1O15537 224 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 NANOS2P60321 138 aaKnown RBP8.46□□□□□ -1.06
DDB1-223ENST00000543658 TMEM88Q6PEY1 159 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 CBLN2Q8IUK8 224 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 LINC00612Q8N6U2 182 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 C18orf15Q96N68 181 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 MSRB1Q9NZV6 116 aa8.46□□□□□ -1.06
DDB1-223ENST00000543658 F5H697 171 aa8.45□□□□□ -1.06
DDB1-223ENST00000543658 C12orf74Q32Q52 190 aa8.45□□□□□ -1.06
DDB1-223ENST00000543658 COX19Q49B96 90 aa8.45□□□□□ -1.06
DDB1-223ENST00000543658 CFAP126Q5VTH2 177 aa8.45□□□□□ -1.06
DDB1-223ENST00000543658 RASL11AQ6T310 242 aa8.45□□□□□ -1.06
DDB1-223ENST00000543658 C14orf178Q8N769 122 aaPredicted RBP8.45□□□□□ -1.06
DDB1-223ENST00000543658 JPT2Q9H910 190 aa8.45□□□□□ -1.06
DDB1-223ENST00000543658 IGHV3-73A0A0B4J1V6 119 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 TRAV10A0A0B4J240 114 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 F5H768 121 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 EVI2AP22794 236 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 ELOBQ15370 118 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 ZFP2Q6ZN57 461 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 Q6ZTC4 211 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 ZNF479Q96JC4 524 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 TMEM191AQ9H0A3 160 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 EDA2RQ9HAV5 297 aa8.44□□□□□ -1.06
DDB1-223ENST00000543658 TGIF2-C20orf24A0A0A6YYL0 155 aa8.43□□□□□ -1.06
DDB1-223ENST00000543658 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
DDB1-223ENST00000543658 SLAQ13239 276 aa8.43□□□□□ -1.06
DDB1-223ENST00000543658 TENM3Q9P273 2699 aa8.43□□□□□ -1.06
DDB1-223ENST00000543658 TRBV24-1A0A075B6N3 115 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 DEFB131BA0A096LNP1 70 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 H7C1H1 209 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 SCO1O75880 301 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 HLA-DQA1P01909 254 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 CRYGDP07320 174 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 SAMD10Q9BYL1 202 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 PRKDCP78527 4128 aaKnown RBP8.42□□□□□ -1.06
DDB1-223ENST00000543658 DNAH9Q9NYC9 4486 aa8.42□□□□□ -1.06
DDB1-223ENST00000543658 HUWE1Q7Z6Z7 4374 aaKnown RBP8.41□□□□□ -1.06
DDB1-223ENST00000543658 MT-ND6P03923 174 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 RHOHQ15669 191 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 AMN1Q8IY45 258 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 POM121L12Q8N7R1 296 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 FAM210BQ96KR6 192 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 PRADC1Q9BSG0 188 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 PRO0255Q9UI72 69 aa8.41□□□□□ -1.06
DDB1-223ENST00000543658 K7EQD1 137 aa8.4□□□□□ -1.06
DDB1-223ENST00000543658 GATA1P15976 413 aaPredicted RBP8.4□□□□□ -1.06
DDB1-223ENST00000543658 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
DDB1-223ENST00000543658 PHLDA1Q8WV24 401 aaPredicted RBP8.4□□□□□ -1.06
DDB1-223ENST00000543658 FRZBQ92765 325 aa8.4□□□□□ -1.06
DDB1-223ENST00000543658 GNB1LQ9BYB4 327 aa8.4□□□□□ -1.06
DDB1-223ENST00000543658 HHLA3Q9XRX5 114 aa8.4□□□□□ -1.06
DDB1-223ENST00000543658 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 TRBV6-4A0A1B0GX49 114 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 NUPR2A6NF83 97 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 PAX4O43316 350 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 HOXA5P20719 270 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 FHL2Q14192 279 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 FAM104BQ5XKR9 115 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 UFSP1Q6NVU6 142 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 TMEM136Q6ZRR5 245 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 MRAP2Q96G30 205 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 WWC2-AS2Q96NR7 200 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 KIF25-AS1Q9Y6Z4 181 aa8.39□□□□□ -1.07
DDB1-223ENST00000543658 TRAV26-1A0A087WT03 109 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 A0A0J9YY99 117 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 APCSP02743 223 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 RAB4AP20338 218 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 CKS2P33552 79 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 SUMO4Q6EEV6 95 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.38□□□□□ -1.07
DDB1-223ENST00000543658 MRPL18Q9H0U6 180 aaKnown RBP8.38□□□□□ -1.07
DDB1-223ENST00000543658 KLK5Q9Y337 293 aaPredicted RBP8.38□□□□□ -1.07
DDB1-223ENST00000543658 TRAPPC1Q9Y5R8 145 aa8.38□□□□□ -1.07
DDB1-223ENST00000543658 TRAV26-2A0A0B4J265 109 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 TRBV10-1A0A0K0K1A3 114 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 PPP1R17O96001 155 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 PPBPP02775 128 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 RPS10P46783 165 aaKnown RBP8.37□□□□□ -1.07
DDB1-223ENST00000543658 CRYBA4P53673 196 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 RPL36AP83881 106 aaKnown RBP8.37□□□□□ -1.07
DDB1-223ENST00000543658 FABP9Q0Z7S8 132 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 MRPL51Q4U2R6 128 aaKnown RBP8.37□□□□□ -1.07
DDB1-223ENST00000543658 SLC25A29Q8N8R3 303 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 RPL36ALQ969Q0 106 aaKnown RBP8.37□□□□□ -1.07
DDB1-223ENST00000543658 RNF185Q96GF1 192 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 YPEL4Q96NS1 127 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 ICOSQ9Y6W8 199 aa8.37□□□□□ -1.07
DDB1-223ENST00000543658 D6R8Y8 96 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 NCR2O95944 276 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 GYPEP15421 78 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 LINC00315P59091 139 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 OR10J3Q5JRS4 329 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 ORMDL3Q8N138 153 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 C15orf53Q8NAA6 179 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 MUC7Q8TAX7 377 aa8.36□□□□□ -1.07
DDB1-223ENST00000543658 IGLL5B9A064 214 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms