RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 OR10J3Q5JRS4 329 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 KCNS1Q96KK3 526 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 KNCNA6PVL3 124 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 H3BMM0 161 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 K7EP34 96 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 PF4P02776 101 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 SRIP30626 198 aa6.91□□□□□ -1.3
GNE-206ENST00000543356 SETXQ7Z333 2677 aaKnown RBP6.9□□□□□ -1.3
GNE-206ENST00000543356 OR11H12B2RN74 326 aa6.9□□□□□ -1.3
GNE-206ENST00000543356 ZNF324O75467 553 aaPredicted RBP6.9□□□□□ -1.3
GNE-206ENST00000543356 CMC4P56277 68 aaPredicted RBP6.9□□□□□ -1.3
GNE-206ENST00000543356 RPL24P83731 157 aaKnown RBP6.9□□□□□ -1.3
GNE-206ENST00000543356 ODF3L2Q3SX64 289 aa6.9□□□□□ -1.3
GNE-206ENST00000543356 ANXA2RQ3ZCQ2 193 aa6.9□□□□□ -1.3
GNE-206ENST00000543356 OR11H2Q8NH07 326 aa6.9□□□□□ -1.3
GNE-206ENST00000543356 IGHV4-4A0A075B6R2 117 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 CYSRT1A8MQ03 144 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 IGKV3-20P01619 116 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 ASIPP42127 132 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 CACNG7P62955 275 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 PRR31Q5SQ13 230 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 GTF2H5Q6ZYL4 71 aa6.9□□□□□ -1.31
GNE-206ENST00000543356 NTF3P20783 257 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 TWIST1Q15672 202 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 PMCHL1Q16048 86 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 SPINK13Q1W4C9 94 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 RNF183Q96D59 192 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 SPATA25Q9BR10 227 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 RBMY1BA6NDE4 496 aaKnown RBP6.89□□□□□ -1.31
GNE-206ENST00000543356 RBMY1EA6NEQ0 496 aaKnown RBP6.89□□□□□ -1.31
GNE-206ENST00000543356 M0R2Z0 102 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 RBMY1DP0C7P1 496 aaKnown RBP6.89□□□□□ -1.31
GNE-206ENST00000543356 FAM159AQ6UWV7 190 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 SMIM20Q8N5G0 67 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 TMEM191AQ9H0A3 160 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 SCRT2Q9NQ03 307 aa6.89□□□□□ -1.31
GNE-206ENST00000543356 H3BVH4 76 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 BEAN1Q3B7T3 259 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 FAM104BQ5XKR9 115 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 C12orf54Q6X4T0 127 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 C18orf32Q8TCD1 76 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 TRAV12-2A0A075B6T6 113 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.88□□□□□ -1.31
GNE-206ENST00000543356 H3BUT2 72 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 OR10AG1Q8NH19 301 aa6.88□□□□□ -1.31
GNE-206ENST00000543356 F8WDY8 70 aa6.87□□□□□ -1.31
GNE-206ENST00000543356 S100A4P26447 101 aaKnown RBP6.87□□□□□ -1.31
GNE-206ENST00000543356 U3KQK5 164 aa6.87□□□□□ -1.31
GNE-206ENST00000543356 hDV102S1A0JD36 115 aa6.87□□□□□ -1.31
GNE-206ENST00000543356 CRXO43186 299 aaPredicted RBP6.87□□□□□ -1.31
GNE-206ENST00000543356 RNASE3P12724 160 aaKnown RBP6.87□□□□□ -1.31
GNE-206ENST00000543356 RPL32P62910 135 aaKnown RBP6.87□□□□□ -1.31
GNE-206ENST00000543356 OXLD1Q5BKU9 147 aa6.87□□□□□ -1.31
GNE-206ENST00000543356 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
GNE-206ENST00000543356 MSRB1Q9NZV6 116 aa6.87□□□□□ -1.31
GNE-206ENST00000543356 IGHV1OR15-1A0A075B7D0 117 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 C9orf118A6NHY6 69 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 GNRH2O43555 120 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 NXPH4O95158 308 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 INSL3P51460 131 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 SPANXN1Q5VSR9 72 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 TRPT1Q86TN4 253 aaKnown RBP6.86□□□□□ -1.31
GNE-206ENST00000543356 AMN1Q8IY45 258 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 SLC25A34Q6PIV7 304 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 STHQ8IWL8 128 aa6.86□□□□□ -1.31
GNE-206ENST00000543356 IGHV3-16A0A0C4DH30 117 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 CD7P09564 240 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 RBMY1A1P0DJD3 496 aaKnown RBP6.85□□□□□ -1.31
GNE-206ENST00000543356 RBMY1CP0DJD4 496 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 FXYD7P58549 80 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 RBMY1FQ15415 496 aaKnown RBP6.85□□□□□ -1.31
GNE-206ENST00000543356 MRPL51Q4U2R6 128 aaKnown RBP6.85□□□□□ -1.31
GNE-206ENST00000543356 C9orf66Q5T8R8 295 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 RNF185Q96GF1 192 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 LINC00467Q9BRT7 94 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 MRPL16Q9NX20 251 aaKnown RBP6.85□□□□□ -1.31
GNE-206ENST00000543356 PHLDA3Q9Y5J5 127 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 TRGV11A0A075B6L2 103 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 B5MCH6 92 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 INSP01308 110 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 ORMDL3Q8N138 153 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 C9orf85Q96MD7 179 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 C19orf73Q9NVV2 129 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 F8P00451 2351 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 C2CD3Q4AC94 2353 aa6.85□□□□□ -1.31
GNE-206ENST00000543356 KRTAP24-1Q3LI83 254 aa6.84□□□□□ -1.31
GNE-206ENST00000543356 C2orf91Q6ZV80 131 aa6.84□□□□□ -1.31
GNE-206ENST00000543356 TIMM8BQ9Y5J9 83 aaPredicted RBP6.84□□□□□ -1.31
GNE-206ENST00000543356 D6R8Y8 96 aa6.84□□□□□ -1.31
GNE-206ENST00000543356 Q8N1Y9 231 aa6.84□□□□□ -1.31
GNE-206ENST00000543356 ERG28Q9UKR5 140 aa6.84□□□□□ -1.31
GNE-206ENST00000543356 SPCS1Q9Y6A9 102 aa6.84□□□□□ -1.31
GNE-206ENST00000543356 M0R381 172 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 CHCHD1Q96BP2 118 aaKnown RBP6.83□□□□□ -1.32
GNE-206ENST00000543356 PRELID3AQ96N28 172 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 EVI2AP22794 236 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 CKS2P33552 79 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 MTURNQ8N3F0 131 aa6.83□□□□□ -1.32
GNE-206ENST00000543356 OR5A1Q8NGJ0 315 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms