RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ICOSQ9Y6W8 199 aa11.9□□□□□ -0.5
RABGGTA-203ENST00000543002 A0A087WWL8 130 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 A0A096LPF7 62 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 FAM74A4Q5TZK3 123 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 SLC25A29Q8N8R3 303 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 OR10G8Q8NGN5 311 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 TSKUQ8WUA8 353 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 CNFNQ9BYD5 112 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 V9GYV3 84 aa11.89□□□□□ -0.51
RABGGTA-203ENST00000543002 GYPEP15421 78 aa11.88□□□□□ -0.51
RABGGTA-203ENST00000543002 FOXA3P55318 350 aaPredicted RBP11.88□□□□□ -0.51
RABGGTA-203ENST00000543002 MRPL23Q16540 153 aaKnown RBP11.88□□□□□ -0.51
RABGGTA-203ENST00000543002 Q6ZSN1 163 aa11.88□□□□□ -0.51
RABGGTA-203ENST00000543002 GFRA4Q9GZZ7 299 aa11.88□□□□□ -0.51
RABGGTA-203ENST00000543002 TMEM218A2RU14 115 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 FAM231BA6NCW3 169 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 NTF3P20783 257 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 PNRC1Q12796 327 aaPredicted RBP11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 RHOHQ15669 191 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 RNF212Q495C1 297 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 AP1S3Q96PC3 154 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 PRADC1Q9BSG0 188 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
RABGGTA-203ENST00000543002 K7EQD1 137 aa11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 C14orf178Q8N769 122 aaPredicted RBP11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 KMT2CQ8NEZ4 4911 aaKnown RBP11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 CCL18P55774 89 aa11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 UBE2DNLQ8IWF7 75 aa11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 PGLYRP4Q96LB8 373 aa11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 KIF25-AS1Q9Y6Z4 181 aa11.86□□□□□ -0.51
RABGGTA-203ENST00000543002 LYSTQ99698 3801 aa11.85□□□□□ -0.51
RABGGTA-203ENST00000543002 HIGD1CA8MV81 97 aa11.85□□□□□ -0.51
RABGGTA-203ENST00000543002 TRGC1P0CF51 173 aa11.85□□□□□ -0.51
RABGGTA-203ENST00000543002 SMIM17P0DL12 118 aa11.85□□□□□ -0.51
RABGGTA-203ENST00000543002 ADCYAP1P18509 176 aa11.85□□□□□ -0.51
RABGGTA-203ENST00000543002 SRIP30626 198 aa11.85□□□□□ -0.51
RABGGTA-203ENST00000543002 ALMS1Q8TCU4 4167 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 F8W036 122 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 FAM3BP58499 235 aaPredicted RBP11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 RAB4BP61018 213 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 TWIST1Q15672 202 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 ESRGQ1W209 222 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
RABGGTA-203ENST00000543002 SMIM27A0A1W2PRY6 76 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 EVI2AP22794 236 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 LINC00315P59091 139 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 ZNF56Q15929 161 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 SH2D6Q7Z4S9 175 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 BORCS7Q96B45 105 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 SEC11CQ9BY50 192 aa11.83□□□□□ -0.52
RABGGTA-203ENST00000543002 A0A1B0GUT8 65 aa11.82□□□□□ -0.52
RABGGTA-203ENST00000543002 PPP1R2P9O14990 202 aa11.82□□□□□ -0.52
RABGGTA-203ENST00000543002 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
RABGGTA-203ENST00000543002 NAT8BQ9UHF3 227 aa11.82□□□□□ -0.52
RABGGTA-203ENST00000543002 TRBV10-1A0A0K0K1A3 114 aa11.81□□□□□ -0.52
RABGGTA-203ENST00000543002 F5H697 171 aa11.81□□□□□ -0.52
RABGGTA-203ENST00000543002 LYPD5Q6UWN5 251 aa11.81□□□□□ -0.52
RABGGTA-203ENST00000543002 DPH3P1Q9H4G8 78 aa11.81□□□□□ -0.52
RABGGTA-203ENST00000543002 Q9UF83 564 aa11.81□□□□□ -0.52
RABGGTA-203ENST00000543002 GAGE12JA6NER3 117 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 MT-ND4LP03901 98 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 MGPP08493 103 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 LINC00694P0DN24 101 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 GAGE1Q13065 139 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 GAGE4Q13068 117 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 GAGE5Q13069 117 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 GAGE13Q4V321 117 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 ANAPC16Q96DE5 110 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 MRPS16Q9Y3D3 137 aaKnown RBP11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 DNAH1Q9P2D7 4330 aa11.8□□□□□ -0.52
RABGGTA-203ENST00000543002 SMIM15Q7Z3B0 74 aa11.79□□□□□ -0.52
RABGGTA-203ENST00000543002 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
RABGGTA-203ENST00000543002 UPK3BQ9BT76 320 aa11.79□□□□□ -0.52
RABGGTA-203ENST00000543002 TIRAPP58753 221 aa11.78□□□□□ -0.52
RABGGTA-203ENST00000543002 RIGQ13278 110 aa11.78□□□□□ -0.52
RABGGTA-203ENST00000543002 C10orf91Q5T1B1 145 aa11.78□□□□□ -0.52
RABGGTA-203ENST00000543002 ATP6V0E2Q8NHE4 81 aa11.78□□□□□ -0.52
RABGGTA-203ENST00000543002 SACSQ9NZJ4 4579 aa11.77□□□□□ -0.53
RABGGTA-203ENST00000543002 RPL36AP83881 106 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-203ENST00000543002 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
RABGGTA-203ENST00000543002 RPL36ALQ969Q0 106 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-203ENST00000543002 CARHSP1Q9Y2V2 147 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-203ENST00000543002 VPS13DQ5THJ4 4388 aa11.76□□□□□ -0.53
RABGGTA-203ENST00000543002 TRBV7-3A0A075B6L6 115 aa11.76□□□□□ -0.53
RABGGTA-203ENST00000543002 H7C1H1 209 aa11.76□□□□□ -0.53
RABGGTA-203ENST00000543002 M0QY20 66 aa11.76□□□□□ -0.53
RABGGTA-203ENST00000543002 NEXN-AS1Q8NBZ9 246 aa11.76□□□□□ -0.53
RABGGTA-203ENST00000543002 TMEM191AQ9H0A3 160 aa11.75□□□□□ -0.53
RABGGTA-203ENST00000543002 GTSF1LQ9H1H1 148 aa11.75□□□□□ -0.53
RABGGTA-203ENST00000543002 UBE2D3P61077 147 aa11.74□□□□□ -0.53
RABGGTA-203ENST00000543002 UBE2D2P62837 147 aa11.74□□□□□ -0.53
RABGGTA-203ENST00000543002 Q9H8V8 135 aa11.74□□□□□ -0.53
RABGGTA-203ENST00000543002 IGLV2-18A0A075B6J9 118 aa11.73□□□□□ -0.53
RABGGTA-203ENST00000543002 A0A1B0GW15 77 aa11.73□□□□□ -0.53
RABGGTA-203ENST00000543002 RASL11AQ6T310 242 aa11.73□□□□□ -0.53
RABGGTA-203ENST00000543002 DNAJC30Q96LL9 226 aa11.73□□□□□ -0.53
RABGGTA-203ENST00000543002 CTDSP1Q9GZU7 261 aa11.73□□□□□ -0.53
RABGGTA-203ENST00000543002 RYR2Q92736 4967 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms