RNA–Protein interactions for RNA: ENST00000541938.1

SAMD1-203, Transcript of sterile alpha motif domain containing 1, humanhuman

TSL 3

Gene SAMD1, Length 143 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1-203ENST00000541938 Q6ZRN7 208 aaPredicted RBP13.14□□□□□ -0.31
SAMD1-203ENST00000541938 MED9Q9NWA0 146 aa13.14□□□□□ -0.31
SAMD1-203ENST00000541938 Q9UF83 564 aa13.14□□□□□ -0.31
SAMD1-203ENST00000541938 TRAV8-6A0A0B4J262 113 aa13.13□□□□□ -0.31
SAMD1-203ENST00000541938 A0A1B0GVG6 124 aa13.13□□□□□ -0.31
SAMD1-203ENST00000541938 PDE6DO43924 150 aa13.13□□□□□ -0.31
SAMD1-203ENST00000541938 GTSF1LQ9H1H1 148 aa13.13□□□□□ -0.31
SAMD1-203ENST00000541938 IGHV3-38A0A0C4DH36 116 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 IGLV2-8P01709 118 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 OR10J3Q5JRS4 329 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 LELP1Q5T871 98 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 ALKAL2Q6UX46 152 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 OR10AG1Q8NH19 301 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 VAX2Q9UIW0 290 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 PKHD1P08F94 4074 aa13.12□□□□□ -0.31
SAMD1-203ENST00000541938 K7EP13 123 aa13.11□□□□□ -0.31
SAMD1-203ENST00000541938 SSBP4Q9BWG4 385 aaPredicted RBP13.11□□□□□ -0.31
SAMD1-203ENST00000541938 MSRB1Q9NZV6 116 aa13.11□□□□□ -0.31
SAMD1-203ENST00000541938 MUC21A0A0G2JKD1 596 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 MUC21A0A140T8X8 626 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 C16orf90A8MZG2 172 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 SNAI2O43623 268 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 LINC00694P0DN24 101 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 GNG4P50150 75 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 NKX2-5P52952 324 aaPredicted RBP13.1□□□□□ -0.31
SAMD1-203ENST00000541938 SPATA12Q7Z6I5 190 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 NFE4Q86UQ8 179 aa13.1□□□□□ -0.31
SAMD1-203ENST00000541938 DAZAP1Q96EP5 407 aaKnown RBP13.1□□□□□ -0.31
SAMD1-203ENST00000541938 TAGLN2P37802 199 aaKnown RBP13.09□□□□□ -0.31
SAMD1-203ENST00000541938 BLOC1S1P78537 153 aa13.09□□□□□ -0.31
SAMD1-203ENST00000541938 LINC01556Q5JQF7 62 aa13.09□□□□□ -0.31
SAMD1-203ENST00000541938 C10orf126Q8N4M7 172 aa13.09□□□□□ -0.31
SAMD1-203ENST00000541938 OR5AL1P0C617 328 aa13.08□□□□□ -0.32
SAMD1-203ENST00000541938 SSTP61278 116 aa13.08□□□□□ -0.32
SAMD1-203ENST00000541938 SPANXN1Q5VSR9 72 aa13.08□□□□□ -0.32
SAMD1-203ENST00000541938 SMIM12Q96EX1 92 aa13.08□□□□□ -0.32
SAMD1-203ENST00000541938 BOLA1Q9Y3E2 137 aa13.08□□□□□ -0.32
SAMD1-203ENST00000541938 TRBV20OR9-2A0A075B6H5 130 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 C19orf71A6NCJ1 209 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 IGHV3-30P01768 117 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 IGHV3-33P01772 117 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 IGHV3-30-3P0DP02 117 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 IGHV3-30-5P0DP03 117 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 GZMBP10144 247 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 OR2D3Q8NGH3 330 aa13.07□□□□□ -0.32
SAMD1-203ENST00000541938 KRTAP10-2P60368 255 aa13.06□□□□□ -0.32
SAMD1-203ENST00000541938 RPS20P60866 119 aaKnown RBP13.05□□□□□ -0.32
SAMD1-203ENST00000541938 BIN3Q9NQY0 253 aa13.05□□□□□ -0.32
SAMD1-203ENST00000541938 TRBV10-1A0A0K0K1A3 114 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 RBFOX3A6NFN3 312 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 IBA57-AS1B1ANH7 110 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 P01737 135 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 IGLC6P0CF74 106 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 RAB4BP61018 213 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 LYPD6BQ8NI32 183 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 TPPP3Q9BW30 176 aa13.04□□□□□ -0.32
SAMD1-203ENST00000541938 A0A087WWC5 75 aa13.03□□□□□ -0.32
SAMD1-203ENST00000541938 ERVFC1-1P60608 527 aa13.03□□□□□ -0.32
SAMD1-203ENST00000541938 RPL36AP83881 106 aaKnown RBP13.03□□□□□ -0.32
SAMD1-203ENST00000541938 ZNF56Q15929 161 aa13.03□□□□□ -0.32
SAMD1-203ENST00000541938 FER1L6-AS1Q8NA97 138 aa13.03□□□□□ -0.32
SAMD1-203ENST00000541938 RPL36ALQ969Q0 106 aaKnown RBP13.03□□□□□ -0.32
SAMD1-203ENST00000541938 EREGO14944 169 aa13.02□□□□□ -0.33
SAMD1-203ENST00000541938 Q8N3U1 123 aa13.02□□□□□ -0.33
SAMD1-203ENST00000541938 NUDT10Q8NFP7 164 aa13.02□□□□□ -0.33
SAMD1-203ENST00000541938 OCC1Q8TAD7 63 aa13.02□□□□□ -0.33
SAMD1-203ENST00000541938 NUDT11Q96G61 164 aa13.02□□□□□ -0.33
SAMD1-203ENST00000541938 TRBV7-3A0A075B6L6 115 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 A0A087WTM6 91 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 XKRY2A2RUG3 117 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 F5H697 171 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 UBE2D3P61077 147 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 UBE2D2P62837 147 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 KIF25-AS1Q9Y6Z4 181 aa13.01□□□□□ -0.33
SAMD1-203ENST00000541938 SMIM17P0DL12 118 aa13□□□□□ -0.33
SAMD1-203ENST00000541938 NEXN-AS1Q8NBZ9 246 aa13□□□□□ -0.33
SAMD1-203ENST00000541938 OR10G8Q8NGN5 311 aa13□□□□□ -0.33
SAMD1-203ENST00000541938 AP1S3Q96PC3 154 aa13□□□□□ -0.33
SAMD1-203ENST00000541938 Q9HAA7 133 aa13□□□□□ -0.33
SAMD1-203ENST00000541938 TMEM250H0YL14 139 aa12.99□□□□□ -0.33
SAMD1-203ENST00000541938 K7EN84 100 aa12.99□□□□□ -0.33
SAMD1-203ENST00000541938 CACNG7P62955 275 aa12.99□□□□□ -0.33
SAMD1-203ENST00000541938 RYR1P21817 5038 aa12.99□□□□□ -0.33
SAMD1-203ENST00000541938 LRP1BQ9NZR2 4599 aa12.99□□□□□ -0.33
SAMD1-203ENST00000541938 FUSP35637 526 aaKnown RBP eCLIP12.98□□□□□ -0.33
SAMD1-203ENST00000541938 TOR2AQ5JU69 321 aa12.98□□□□□ -0.33
SAMD1-203ENST00000541938 LYZL1Q6UWQ5 148 aa12.98□□□□□ -0.33
SAMD1-203ENST00000541938 PGPEP1Q9NXJ5 209 aa12.98□□□□□ -0.33
SAMD1-203ENST00000541938 F2Z2F3 143 aa12.97□□□□□ -0.33
SAMD1-203ENST00000541938 PSCAO43653 123 aa12.97□□□□□ -0.33
SAMD1-203ENST00000541938 CEBPGP53567 150 aa12.97□□□□□ -0.33
SAMD1-203ENST00000541938 DAZ4Q86SG3 579 aaKnown RBP12.97□□□□□ -0.33
SAMD1-203ENST00000541938 RNASE7Q9H1E1 156 aaKnown RBP12.97□□□□□ -0.33
SAMD1-203ENST00000541938 DAZ3Q9NR90 486 aaKnown RBP12.97□□□□□ -0.33
SAMD1-203ENST00000541938 NIT1Q86X76 327 aa12.96□□□□□ -0.33
SAMD1-203ENST00000541938 EIF5A2Q9GZV4 153 aaKnown RBP12.96□□□□□ -0.33
SAMD1-203ENST00000541938 RPP21Q9H633 154 aaKnown RBP12.96□□□□□ -0.33
SAMD1-203ENST00000541938 PCLOQ9Y6V0 5065 aa12.96□□□□□ -0.33
SAMD1-203ENST00000541938 MGPP08493 103 aa12.95□□□□□ -0.34
SAMD1-203ENST00000541938 LAGE3Q14657 143 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms