RNA–Protein interactions for RNA: ENST00000541687.5

GCFC2-211, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 2 BASIC

Gene GCFC2, Length 4,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-211ENST00000541687 GAGE2AQ6NT46 116 aa11.18□□□□□ -0.62
GCFC2-211ENST00000541687 PRADC1Q9BSG0 188 aa11.18□□□□□ -0.62
GCFC2-211ENST00000541687 LAMTOR3Q9UHA4 124 aa11.18□□□□□ -0.62
GCFC2-211ENST00000541687 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
GCFC2-211ENST00000541687 IGHV3-16A0A0C4DH30 117 aa11.17□□□□□ -0.62
GCFC2-211ENST00000541687 CTRLP40313 264 aa11.17□□□□□ -0.62
GCFC2-211ENST00000541687 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 IGHV7-4-1A0A0J9YVY3 117 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 F8VRH5 84 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 TAX1BP3O14907 124 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 IGLV2-11P01706 119 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 RPL35AP18077 110 aaKnown RBP11.16□□□□□ -0.62
GCFC2-211ENST00000541687 SIRPDQ9H106 197 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 AJUBAQ96IF1 538 aa11.16□□□□□ -0.62
GCFC2-211ENST00000541687 FLNBO75369 2602 aaKnown RBP11.15□□□□□ -0.62
GCFC2-211ENST00000541687 PCSK5Q92824 1860 aa11.15□□□□□ -0.62
GCFC2-211ENST00000541687 FBXL19-AS1Q494R0 122 aa11.15□□□□□ -0.62
GCFC2-211ENST00000541687 SPATA12Q7Z6I5 190 aa11.15□□□□□ -0.62
GCFC2-211ENST00000541687 CCDC140Q96MF4 163 aa11.15□□□□□ -0.62
GCFC2-211ENST00000541687 TRBV25-1A0A075B6N4 114 aa11.15□□□□□ -0.63
GCFC2-211ENST00000541687 A0A1W2PPM0 123 aa11.15□□□□□ -0.63
GCFC2-211ENST00000541687 LY6LH3BQJ8 138 aa11.15□□□□□ -0.63
GCFC2-211ENST00000541687 KLHL30-AS1Q8NEE0 82 aa11.15□□□□□ -0.63
GCFC2-211ENST00000541687 FGF6P10767 208 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 NSUN5P1Q3KNT7 163 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 MYMXA0A1B0GTQ4 84 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 ODF3BA8MYP8 253 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 K7EP34 96 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 LGALS1P09382 135 aaKnown RBP11.14□□□□□ -0.63
GCFC2-211ENST00000541687 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 DEFB112Q30KQ8 113 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 RASL10AQ92737 203 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 IGF1P05019 195 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 DEFB130BP0DP73 79 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 DEFB130AP0DP74 79 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 RNASE13Q5GAN3 156 aaKnown RBP11.14□□□□□ -0.63
GCFC2-211ENST00000541687 LINC01356Q8N9X3 169 aa11.14□□□□□ -0.63
GCFC2-211ENST00000541687 GAGE12HA6NDE8 117 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 SAP30O75446 220 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 TCTEX1D4Q5JR98 221 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 XCL2Q9UBD3 114 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 IGHV3-38A0A0C4DH36 116 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 AZU1P20160 251 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 C19orf84I3L1E1 186 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 RS1O15537 224 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 FXYD2P54710 66 aa11.13□□□□□ -0.63
GCFC2-211ENST00000541687 HLA-DRB4P13762 266 aa11.12□□□□□ -0.63
GCFC2-211ENST00000541687 PFN2P35080 140 aa11.12□□□□□ -0.63
GCFC2-211ENST00000541687 SH2D6Q7Z4S9 175 aa11.12□□□□□ -0.63
GCFC2-211ENST00000541687 HLA-DRB4X5D2U9 266 aa11.12□□□□□ -0.63
GCFC2-211ENST00000541687 RBAKDNA6NC62 111 aa11.12□□□□□ -0.63
GCFC2-211ENST00000541687 LMO4P61968 165 aa11.12□□□□□ -0.63
GCFC2-211ENST00000541687 CDKN1BP46527 198 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 C16orf54Q6UWD8 224 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 SMAD5-AS1Q9Y6J3 95 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 PMVKQ15126 192 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 CEND1Q8N111 149 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 PPDPFLQ8WWR9 84 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 INSP01308 110 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 CFHR3Q02985 330 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 Q8N976 141 aa11.11□□□□□ -0.63
GCFC2-211ENST00000541687 TNFRSF13BO14836 293 aaPredicted RBP11.1□□□□□ -0.63
GCFC2-211ENST00000541687 DSPP15924 2871 aaKnown RBP11.1□□□□□ -0.63
GCFC2-211ENST00000541687 GAS8-AS1O95177 125 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 DSCR9P59020 149 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 LEPROTO15243 131 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 PRB1P04280 392 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 C9orf153Q5TBE3 101 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 ZNF493Q6ZR52 646 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 URB1-AS1Q96HZ7 61 aa11.1□□□□□ -0.63
GCFC2-211ENST00000541687 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 TEX48A0A1B0GUV7 120 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 GAGE12JA6NER3 117 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 GAGE4Q13068 117 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 GAGE5Q13069 117 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 NBEAQ8NFP9 2946 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 F8W1H4 67 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 TRBV20-1A0A075B6N2 111 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 ODF1Q14990 250 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 PRO1854Q9UHT4 67 aa11.09□□□□□ -0.63
GCFC2-211ENST00000541687 H3BMM0 161 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 RPL39P62891 51 aaKnown RBP11.08□□□□□ -0.64
GCFC2-211ENST00000541687 UBE2WQ96B02 151 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 NDUFA12Q9UI09 145 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 NXPH4O95158 308 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 BOD1L2Q8IYS8 172 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 C12orf74Q32Q52 190 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 TRPT1Q86TN4 253 aaKnown RBP11.08□□□□□ -0.64
GCFC2-211ENST00000541687 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
GCFC2-211ENST00000541687 NTN5Q8WTR8 489 aaPredicted RBP11.07□□□□□ -0.64
GCFC2-211ENST00000541687 GHRHP01286 108 aa11.07□□□□□ -0.64
GCFC2-211ENST00000541687 IGLC6P0CF74 106 aa11.07□□□□□ -0.64
GCFC2-211ENST00000541687 Q6ZQT7 251 aa11.07□□□□□ -0.64
GCFC2-211ENST00000541687 MRPL53Q96EL3 112 aaKnown RBP11.07□□□□□ -0.64
GCFC2-211ENST00000541687 C9orf47Q6ZRZ4 202 aa11.07□□□□□ -0.64
GCFC2-211ENST00000541687 SIVA1O15304 175 aa11.06□□□□□ -0.64
GCFC2-211ENST00000541687 HOXD3P31249 432 aaPredicted RBP11.06□□□□□ -0.64
GCFC2-211ENST00000541687 C10orf105Q8TEF2 133 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms