RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 RHOHQ15669 191 aa13.51□□□□□ -0.25
DDX55-207ENST00000540763 MRPL23Q16540 153 aaKnown RBP13.51□□□□□ -0.25
DDX55-207ENST00000540763 JPT2Q9H910 190 aa13.51□□□□□ -0.25
DDX55-207ENST00000540763 FAM231BA6NCW3 169 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 CRYGDP07320 174 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 ADIRFQ15847 76 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 AP1S3Q96PC3 154 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 PRADC1Q9BSG0 188 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 TPPP3Q9BW30 176 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 GFRA4Q9GZZ7 299 aa13.5□□□□□ -0.25
DDX55-207ENST00000540763 FOXA3P55318 350 aaPredicted RBP13.49□□□□□ -0.25
DDX55-207ENST00000540763 CCL18P55774 89 aa13.49□□□□□ -0.25
DDX55-207ENST00000540763 LYZL1Q6UWQ5 148 aa13.49□□□□□ -0.25
DDX55-207ENST00000540763 SH2D6Q7Z4S9 175 aa13.49□□□□□ -0.25
DDX55-207ENST00000540763 SLC25A29Q8N8R3 303 aa13.49□□□□□ -0.25
DDX55-207ENST00000540763 SAMD10Q9BYL1 202 aa13.49□□□□□ -0.25
DDX55-207ENST00000540763 IGHV3-73A0A0B4J1V6 119 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 K7EQD1 137 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 GYPEP15421 78 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 PNRC1Q12796 327 aaPredicted RBP13.48□□□□□ -0.25
DDX55-207ENST00000540763 UBE2DNLQ8IWF7 75 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 TSKUQ8WUA8 353 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 V9GYV3 84 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 BIRC6Q9NR09 4857 aa13.48□□□□□ -0.25
DDX55-207ENST00000540763 LINC00862A6NCI5 91 aa13.47□□□□□ -0.25
DDX55-207ENST00000540763 FAM74A4Q5TZK3 123 aa13.47□□□□□ -0.25
DDX55-207ENST00000540763 GTSF1Q8WW33 167 aa13.47□□□□□ -0.25
DDX55-207ENST00000540763 A0A087WWL8 130 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 MUC21A0A0G2JKD1 596 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 MUC21A0A140T8X8 626 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 TRGC1P0CF51 173 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 SRIP30626 198 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 NEGR1Q7Z3B1 354 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 OR10G8Q8NGN5 311 aa13.46□□□□□ -0.25
DDX55-207ENST00000540763 RAB4BP61018 213 aa13.45□□□□□ -0.26
DDX55-207ENST00000540763 KIF25-AS1Q9Y6Z4 181 aa13.45□□□□□ -0.26
DDX55-207ENST00000540763 SMIM17P0DL12 118 aa13.44□□□□□ -0.26
DDX55-207ENST00000540763 NTF3P20783 257 aa13.44□□□□□ -0.26
DDX55-207ENST00000540763 Q6ZSN1 163 aa13.44□□□□□ -0.26
DDX55-207ENST00000540763 COMMD7Q86VX2 200 aa13.44□□□□□ -0.26
DDX55-207ENST00000540763 UPK3BQ9BT76 320 aa13.44□□□□□ -0.26
DDX55-207ENST00000540763 LINC00588Q9Y4M8 146 aa13.44□□□□□ -0.26
DDX55-207ENST00000540763 TRBV10-1A0A0K0K1A3 114 aa13.43□□□□□ -0.26
DDX55-207ENST00000540763 ESRGQ1W209 222 aa13.43□□□□□ -0.26
DDX55-207ENST00000540763 C14orf178Q8N769 122 aaPredicted RBP13.43□□□□□ -0.26
DDX55-207ENST00000540763 MRPS16Q9Y3D3 137 aaKnown RBP13.43□□□□□ -0.26
DDX55-207ENST00000540763 LOC100131303A0A0U1RQF7 123 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 TMEM218A2RU14 115 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 HIGD1CA8MV81 97 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 LINC00694P0DN24 101 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 TIRAPP58753 221 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 ZNF56Q15929 161 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 BORCS7Q96B45 105 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 MSRB1Q9NZV6 116 aa13.42□□□□□ -0.26
DDX55-207ENST00000540763 VPS13DQ5THJ4 4388 aa13.41□□□□□ -0.26
DDX55-207ENST00000540763 PPP1R2P9O14990 202 aa13.41□□□□□ -0.26
DDX55-207ENST00000540763 LINC00315P59091 139 aa13.41□□□□□ -0.26
DDX55-207ENST00000540763 SSTP61278 116 aa13.41□□□□□ -0.26
DDX55-207ENST00000540763 TWIST1Q15672 202 aa13.41□□□□□ -0.26
DDX55-207ENST00000540763 DPH3P1Q9H4G8 78 aa13.41□□□□□ -0.26
DDX55-207ENST00000540763 SMIM27A0A1W2PRY6 76 aa13.4□□□□□ -0.26
DDX55-207ENST00000540763 LYPD5Q6UWN5 251 aa13.4□□□□□ -0.26
DDX55-207ENST00000540763 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.26
DDX55-207ENST00000540763 PGLYRP4Q96LB8 373 aa13.4□□□□□ -0.26
DDX55-207ENST00000540763 NAT8BQ9UHF3 227 aa13.4□□□□□ -0.26
DDX55-207ENST00000540763 DNAH6Q9C0G6 4158 aa13.39□□□□□ -0.27
DDX55-207ENST00000540763 HYDINQ4G0P3 5121 aa13.39□□□□□ -0.27
DDX55-207ENST00000540763 A0A1B0GUT8 65 aa13.39□□□□□ -0.27
DDX55-207ENST00000540763 EVI2AP22794 236 aa13.39□□□□□ -0.27
DDX55-207ENST00000540763 SEC11CQ9BY50 192 aa13.39□□□□□ -0.27
DDX55-207ENST00000540763 F8W036 122 aa13.38□□□□□ -0.27
DDX55-207ENST00000540763 ADCYAP1P18509 176 aa13.38□□□□□ -0.27
DDX55-207ENST00000540763 SMIM15Q7Z3B0 74 aa13.38□□□□□ -0.27
DDX55-207ENST00000540763 ANAPC16Q96DE5 110 aa13.38□□□□□ -0.27
DDX55-207ENST00000540763 F5H697 171 aa13.37□□□□□ -0.27
DDX55-207ENST00000540763 H7C1H1 209 aa13.37□□□□□ -0.27
DDX55-207ENST00000540763 RPL36AP83881 106 aaKnown RBP13.37□□□□□ -0.27
DDX55-207ENST00000540763 NUP35Q8NFH5 326 aa13.37□□□□□ -0.27
DDX55-207ENST00000540763 ATP6V0E2Q8NHE4 81 aa13.37□□□□□ -0.27
DDX55-207ENST00000540763 RPL36ALQ969Q0 106 aaKnown RBP13.37□□□□□ -0.27
DDX55-207ENST00000540763 KMT2AQ03164 3969 aa13.37□□□□□ -0.27
DDX55-207ENST00000540763 GAGE12JA6NER3 117 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 MT-ND4LP03901 98 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 MGPP08493 103 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 GAGE1Q13065 139 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 GAGE4Q13068 117 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 GAGE5Q13069 117 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 GAGE13Q4V321 117 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 GTSF1LQ9H1H1 148 aa13.36□□□□□ -0.27
DDX55-207ENST00000540763 TRBV7-3A0A075B6L6 115 aa13.35□□□□□ -0.27
DDX55-207ENST00000540763 RIGQ13278 110 aa13.35□□□□□ -0.27
DDX55-207ENST00000540763 C10orf91Q5T1B1 145 aa13.34□□□□□ -0.27
DDX55-207ENST00000540763 NEXN-AS1Q8NBZ9 246 aa13.34□□□□□ -0.27
DDX55-207ENST00000540763 FRZBQ92765 325 aa13.34□□□□□ -0.27
DDX55-207ENST00000540763 Q9H8V8 135 aa13.34□□□□□ -0.27
DDX55-207ENST00000540763 Q9UF83 564 aa13.34□□□□□ -0.27
DDX55-207ENST00000540763 A0A1B0GW15 77 aa13.33□□□□□ -0.28
DDX55-207ENST00000540763 M0QY20 66 aa13.33□□□□□ -0.28
DDX55-207ENST00000540763 UBE2D3P61077 147 aa13.33□□□□□ -0.28
DDX55-207ENST00000540763 UBE2D2P62837 147 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 211.7 ms