RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 TRBV6-4A0A1B0GX49 114 aa10.39□□□□□ -0.75
MDM1-210ENST00000540418 FOXA3P55318 350 aaPredicted RBP10.39□□□□□ -0.75
MDM1-210ENST00000540418 TSKUQ8WUA8 353 aa10.39□□□□□ -0.75
MDM1-210ENST00000540418 V9GYV3 84 aa10.39□□□□□ -0.75
MDM1-210ENST00000540418 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 SLC25A29Q8N8R3 303 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 ICOSQ9Y6W8 199 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 A0A096LPF7 62 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 TMEM218A2RU14 115 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 Q6ZSN1 163 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 GFRA4Q9GZZ7 299 aa10.38□□□□□ -0.75
MDM1-210ENST00000540418 FAM231BA6NCW3 169 aa10.37□□□□□ -0.75
MDM1-210ENST00000540418 GYPEP15421 78 aa10.37□□□□□ -0.75
MDM1-210ENST00000540418 NTF3P20783 257 aa10.37□□□□□ -0.75
MDM1-210ENST00000540418 MRPL23Q16540 153 aaKnown RBP10.37□□□□□ -0.75
MDM1-210ENST00000540418 PRADC1Q9BSG0 188 aa10.37□□□□□ -0.75
MDM1-210ENST00000540418 CNFNQ9BYD5 112 aa10.37□□□□□ -0.75
MDM1-210ENST00000540418 MSRB1Q9NZV6 116 aa10.37□□□□□ -0.75
MDM1-210ENST00000540418 PNRC1Q12796 327 aaPredicted RBP10.37□□□□□ -0.75
MDM1-210ENST00000540418 K7EQD1 137 aa10.36□□□□□ -0.75
MDM1-210ENST00000540418 RHOHQ15669 191 aa10.36□□□□□ -0.75
MDM1-210ENST00000540418 RNF212Q495C1 297 aa10.36□□□□□ -0.75
MDM1-210ENST00000540418 C14orf178Q8N769 122 aaPredicted RBP10.36□□□□□ -0.75
MDM1-210ENST00000540418 PGLYRP4Q96LB8 373 aa10.36□□□□□ -0.75
MDM1-210ENST00000540418 AP1S3Q96PC3 154 aa10.36□□□□□ -0.75
MDM1-210ENST00000540418 SMIM17P0DL12 118 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 CCL18P55774 89 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 TWIST1Q15672 202 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 LOC100131303A0A0U1RQF7 123 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 HIGD1CA8MV81 97 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 F8W036 122 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 UBE2DNLQ8IWF7 75 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
MDM1-210ENST00000540418 TRGC1P0CF51 173 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 RAB4BP61018 213 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 NACAE9PAV3 2078 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 ADCYAP1P18509 176 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 SRIP30626 198 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 ESRGQ1W209 222 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 NEGR1Q7Z3B1 354 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 BORCS7Q96B45 105 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 SEC11CQ9BY50 192 aa10.34□□□□□ -0.75
MDM1-210ENST00000540418 LYSTQ99698 3801 aa10.33□□□□□ -0.76
MDM1-210ENST00000540418 SH2D6Q7Z4S9 175 aa10.33□□□□□ -0.76
MDM1-210ENST00000540418 PPP1R2P9O14990 202 aa10.33□□□□□ -0.76
MDM1-210ENST00000540418 EVI2AP22794 236 aa10.33□□□□□ -0.76
MDM1-210ENST00000540418 FAM3BP58499 235 aaPredicted RBP10.33□□□□□ -0.76
MDM1-210ENST00000540418 LINC00315P59091 139 aa10.33□□□□□ -0.76
MDM1-210ENST00000540418 NAT8BQ9UHF3 227 aa10.33□□□□□ -0.76
MDM1-210ENST00000540418 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 ZNF56Q15929 161 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 KMT2CQ8NEZ4 4911 aaKnown RBP10.32□□□□□ -0.76
MDM1-210ENST00000540418 A0A1B0GUT8 65 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 F5H697 171 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 MT-ND4LP03901 98 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 NUP35Q8NFH5 326 aa10.32□□□□□ -0.76
MDM1-210ENST00000540418 LYPD5Q6UWN5 251 aa10.31□□□□□ -0.76
MDM1-210ENST00000540418 DPH3P1Q9H4G8 78 aa10.31□□□□□ -0.76
MDM1-210ENST00000540418 ANAPC16Q96DE5 110 aa10.31□□□□□ -0.76
MDM1-210ENST00000540418 Q9UF83 564 aa10.31□□□□□ -0.76
MDM1-210ENST00000540418 ALMS1Q8TCU4 4167 aa10.3□□□□□ -0.76
MDM1-210ENST00000540418 TRBV10-1A0A0K0K1A3 114 aa10.3□□□□□ -0.76
MDM1-210ENST00000540418 SMIM15Q7Z3B0 74 aa10.3□□□□□ -0.76
MDM1-210ENST00000540418 MGPP08493 103 aa10.3□□□□□ -0.76
MDM1-210ENST00000540418 C10orf91Q5T1B1 145 aa10.3□□□□□ -0.76
MDM1-210ENST00000540418 GAGE12JA6NER3 117 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 GAGE1Q13065 139 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 GAGE4Q13068 117 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 GAGE5Q13069 117 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 RIGQ13278 110 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 GAGE13Q4V321 117 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 ATP6V0E2Q8NHE4 81 aa10.29□□□□□ -0.76
MDM1-210ENST00000540418 MRPS16Q9Y3D3 137 aaKnown RBP10.29□□□□□ -0.76
MDM1-210ENST00000540418 LINC00694P0DN24 101 aa10.28□□□□□ -0.76
MDM1-210ENST00000540418 UPK3BQ9BT76 320 aa10.28□□□□□ -0.76
MDM1-210ENST00000540418 DNAH1Q9P2D7 4330 aa10.28□□□□□ -0.76
MDM1-210ENST00000540418 ZNRF2Q8NHG8 242 aa10.28□□□□□ -0.76
MDM1-210ENST00000540418 TIRAPP58753 221 aa10.27□□□□□ -0.77
MDM1-210ENST00000540418 RPL36AP83881 106 aaKnown RBP10.27□□□□□ -0.77
MDM1-210ENST00000540418 SUMO4Q6EEV6 95 aa10.27□□□□□ -0.77
MDM1-210ENST00000540418 RPL36ALQ969Q0 106 aaKnown RBP10.27□□□□□ -0.77
MDM1-210ENST00000540418 CARHSP1Q9Y2V2 147 aaKnown RBP10.27□□□□□ -0.77
MDM1-210ENST00000540418 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
MDM1-210ENST00000540418 H7C1H1 209 aa10.27□□□□□ -0.77
MDM1-210ENST00000540418 M0QY20 66 aa10.27□□□□□ -0.77
MDM1-210ENST00000540418 NEXN-AS1Q8NBZ9 246 aa10.26□□□□□ -0.77
MDM1-210ENST00000540418 TMEM191AQ9H0A3 160 aa10.26□□□□□ -0.77
MDM1-210ENST00000540418 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
MDM1-210ENST00000540418 SACSQ9NZJ4 4579 aa10.26□□□□□ -0.77
MDM1-210ENST00000540418 Q9H8V8 135 aa10.26□□□□□ -0.77
MDM1-210ENST00000540418 VPS13DQ5THJ4 4388 aa10.25□□□□□ -0.77
MDM1-210ENST00000540418 CTDSP1Q9GZU7 261 aa10.25□□□□□ -0.77
MDM1-210ENST00000540418 A0A1B0GW15 77 aa10.25□□□□□ -0.77
MDM1-210ENST00000540418 UBE2D3P61077 147 aa10.25□□□□□ -0.77
MDM1-210ENST00000540418 UBE2D2P62837 147 aa10.25□□□□□ -0.77
MDM1-210ENST00000540418 DNAJC30Q96LL9 226 aa10.25□□□□□ -0.77
MDM1-210ENST00000540418 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
MDM1-210ENST00000540418 IGLV2-18A0A075B6J9 118 aa10.24□□□□□ -0.77
MDM1-210ENST00000540418 GATD1Q8NB37 220 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms