RNA–Protein interactions for RNA: ENST00000539493.2

RAB3GAP1-207, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5 BASIC

Gene RAB3GAP1, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-207ENST00000539493 TMEM75Q8N9X5 138 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LINC01560Q8TB33 94 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 DYNLRB1Q9NP97 96 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ZNRD1Q9P1U0 126 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ITPR1Q14643 2758 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 SPTA1P02549 2419 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 DCHS2Q6V1P9 2916 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ZNF815PA8K554 130 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CCL21O00585 134 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CCL3L1P16619 93 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 FBXL19-AS1Q494R0 122 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LYPD2Q6UXB3 125 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PATE2Q6UY27 113 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CTSZQ9UBR2 303 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 POLEQ07864 2286 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CKS2P33552 79 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 FXYD7P58549 80 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PMAIP1Q13794 54 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PRR15Q8IV56 129 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 THAP8Q8NA92 274 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 IL17DQ8TAD2 202 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 COPS9Q8WXC6 57 aa4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 SRSF12Q8WXF0 261 aaKnown RBP4.37□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LST1O00453 97 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 IGKV1-16P04430 117 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CFHR3Q02985 330 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ERCC8Q13216 396 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 C10orf113Q5VZT2 155 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 SFTA2Q6UW10 78 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 C9orf139Q6ZV77 190 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 AMELXQ99217 191 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PKDREJQ9NTG1 2253 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ATRXP46100 2492 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 NDUFB3O43676 98 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 BCE1O60756 84 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ADORA2A-AS1P86434 159 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CD69Q07108 199 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ZNF833PQ6ZTB9 187 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LINC00482Q8N8I6 264 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 C16orf92Q96LL3 132 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PRR25Q96S07 402 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 KAAG1Q9UBP8 84 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LAMTOR3Q9UHA4 124 aa4.36□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CHD8Q9HCK8 2581 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 TRAV41A0A0B4J266 112 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 GP9P14770 177 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 FHL2Q14192 279 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 Q6JHZ5 121 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 WFDC3Q8IUB2 231 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 FAM110DQ8TAY7 271 aaPredicted RBP4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 TMEM14CQ9P0S9 112 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 CRIP1P50238 77 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ANKHD1Q8IWZ3 2542 aaKnown RBP4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 HRNRQ86YZ3 2850 aaPredicted RBP4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 A0A0J9YX75 114 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PRCDQ00LT1 54 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LAGE3Q14657 143 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 PAPPA-AS1Q5QFB9 102 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LYZL1Q6UWQ5 148 aa4.35□□□□□ -1.71
RAB3GAP1-207ENST00000539493 TACC2O95359 2948 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LYNX1G3V0Z9 82 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 TRIAP1O43715 76 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 COX7A2P2O60397 106 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 NDUFA3O95167 84 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 LYNX1P0DP58 116 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 TIMM21Q9BVV7 248 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 Q9H3A6 140 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 ARFGEF3Q5TH69 2177 aa4.34□□□□□ -1.71
RAB3GAP1-207ENST00000539493 NCOR2Q9Y618 2525 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SAA1P0DJI8 122 aaPredicted RBP4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SYNJ2BPP57105 145 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C4orf48Q5BLP8 95 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SCGB1D4Q6XE38 83 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ZNF491Q8N8L2 437 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TOMM6Q96B49 74 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 Q96MF0 132 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SVEP1Q4LDE5 3571 aa4.34□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGKV1D-37A0A075B6S9 117 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 TRBV7-6A0A0J9YX20 115 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 IGHV1-8P0DP01 117 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 RNASE2P10153 161 aaKnown RBP4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 FAM222AQ5U5X8 452 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 PVRIGQ6DKI7 326 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ZNF575Q86XF7 245 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 RNF182Q8N6D2 247 aa4.33□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ATP5EP56381 51 aaPredicted RBP4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 LYPD1Q8N2G4 141 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 NBASA2RRP1 2371 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 KNCNA6PVL3 124 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 HILS1P60008 231 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 Q6ZS46 218 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 NRACQ8N912 160 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C17orf77Q96MU5 243 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 ICOSQ9Y6W8 199 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 C11orf86A6NJI1 115 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 SMKR1H3BMG3 65 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 H7BZZ5 65 aa4.32□□□□□ -1.72
RAB3GAP1-207ENST00000539493 LY6HO94772 140 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms