RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 TTTY13Q9BZ97 58 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 IGHV4-59P01825 116 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 SPATA12Q7Z6I5 190 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 APRG1Q8IVJ8 170 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 SERTAD4-AS1Q5TG53 156 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 ZSWIM8A7E2V4 1837 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 LYRM9A8MSI8 78 aa7.74□□□□□ -1.17
COL4A6-208ENST00000538570 PI4KAP42356 2102 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 CACNA1BQ00975 2339 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 J3QKU1 62 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 Q8N1Y9 231 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 PLA2G2EQ9NZK7 142 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 FAM215AQ9Y5M1 114 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 FNDC1Q4ZHG4 1894 aaPredicted RBP7.73□□□□□ -1.17
COL4A6-208ENST00000538570 IGLV10-54A0A075B6I4 117 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 LY6G6EA0A0G2JKS1 128 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 GP9P14770 177 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 DEFB136Q30KP8 78 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 CLEC2BQ92478 149 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 U3KQA8 63 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 A0A0J9YXV3 536 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 H3BT86 120 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 LGALS9O00182 355 aa7.73□□□□□ -1.17
COL4A6-208ENST00000538570 NPBQ8NG41 125 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 ZNF524Q96C55 264 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 CTSZQ9UBR2 303 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 TCL1BO95988 128 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 IGHV3-30P01768 117 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 IGHV3-33P01772 117 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 IGHV3-30-3P0DP02 117 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 IGHV3-30-5P0DP03 117 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 SLURP1P55000 103 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 TIMM17AQ99595 171 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 DOPEY2Q9Y3R5 2298 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 SPART-AS1P0CW21 52 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 I3L2K1 104 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 NCR3O14931 201 aa7.72□□□□□ -1.17
COL4A6-208ENST00000538570 TCF20Q9UGU0 1960 aaKnown RBP7.72□□□□□ -1.17
COL4A6-208ENST00000538570 CCL18P55774 89 aa7.71□□□□□ -1.17
COL4A6-208ENST00000538570 PIFOQ8TCI5 191 aa7.71□□□□□ -1.17
COL4A6-208ENST00000538570 FANCD2OSQ96PS1 177 aa7.71□□□□□ -1.17
COL4A6-208ENST00000538570 C9orf47Q6ZRZ4 202 aa7.71□□□□□ -1.17
COL4A6-208ENST00000538570 TMEM61Q8N0U2 210 aa7.71□□□□□ -1.17
COL4A6-208ENST00000538570 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
COL4A6-208ENST00000538570 MYLKQ15746 1914 aa7.71□□□□□ -1.18
COL4A6-208ENST00000538570 COX7CP15954 63 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 UBE2AP49459 152 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 HIST2H2BDQ6DRA6 164 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 C11orf53Q8IXP5 236 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 NDUFA1O15239 70 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 COL4A6Q14031 1691 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 TEX49A0A1B0GTD5 131 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 TOMM6Q96B49 74 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 IGLV11-55A0A075B6I3 123 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 IGHV7-81A0A0B4J1V7 117 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 MSRB1Q9NZV6 116 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 HEATR5AQ86XA9 2040 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 ABCA4P78363 2273 aa7.7□□□□□ -1.18
COL4A6-208ENST00000538570 K7EIM0 57 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 SERP2Q8N6R1 65 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 PKDREJQ9NTG1 2253 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 DAND5Q8N907 189 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 PPDPFQ9H3Y8 114 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 PRO0628Q9UI54 55 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 HIGD2BQ4VC39 106 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 NRGNQ92686 78 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 SNURFQ9Y675 71 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 PRSS33Q8NF86 280 aa7.69□□□□□ -1.18
COL4A6-208ENST00000538570 RPL39P62891 51 aaKnown RBP7.68□□□□□ -1.18
COL4A6-208ENST00000538570 PLXNA4Q9HCM2 1894 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 TRBV7-3A0A075B6L6 115 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 LOC107984640A0A0U1RRK4 108 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 E9PLD3 99 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 SERP1Q9Y6X1 66 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 DOCK8Q8NF50 2099 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 LECT2O14960 151 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 DOCK10Q96BY6 2186 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 C11orf86A6NJI1 115 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 DIRC1Q969H9 104 aa7.68□□□□□ -1.18
COL4A6-208ENST00000538570 NDUFC1O43677 76 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 CTSGP08311 255 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 PATE2Q6UY27 113 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 TICRRQ7Z2Z1 1910 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 RITA1Q96K30 269 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 HHLA3Q9XRX5 114 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 MED14OSP0DP75 135 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 NDUFA11Q86Y39 141 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 SIRPDQ9H106 197 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 IGKV1-17P01599 117 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 IGHV4-38-2P0DP08 117 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 XGP55808 180 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 GTSF1Q8WW33 167 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 WI2-2373I1.2A0A1W2PRP0 233 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 F8W735 103 aaPredicted RBP7.67□□□□□ -1.18
COL4A6-208ENST00000538570 PLA2G2CQ5R387 149 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 DENND4AQ7Z401 1863 aa7.67□□□□□ -1.18
COL4A6-208ENST00000538570 TMEM256-PLSCR3K7ERE1 68 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms