RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 HIST1H2BCP62807 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 SUMO1P63165 101 aaKnown RBP6.03□□□□□ -1.44
USP28-205ENST00000537706 PSG3Q16557 428 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST2H2BEQ16778 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.03□□□□□ -1.44
USP28-205ENST00000537706 Q6ZTI0 123 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 OR10G8Q8NGN5 311 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BHQ93079 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BNQ99877 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 HIST1H2BMQ99879 126 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 TMEM14CQ9P0S9 112 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 PEX7O00628 323 aa6.03□□□□□ -1.44
USP28-205ENST00000537706 TRGV1A0A0A0MS02 117 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 IGHV3-38A0A0C4DH36 116 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 H3BRN7 92 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 TRGC1P0CF51 173 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 SMIM6P0DI80 62 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 LINC01620Q4KN68 170 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 Q8N976 141 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 SHANK2-AS3Q9BTD1 123 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 IL36BQ9NZH7 164 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 HHLA3Q9XRX5 114 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 FAT4Q6V0I7 4981 aa6.02□□□□□ -1.45
USP28-205ENST00000537706 GCGP01275 180 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 NBEAP1P0C6P0 100 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 S100A7AQ86SG5 101 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 C5orf17Q8NAS9 161 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 SMIM12Q96EX1 92 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 GPR82Q96P67 336 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 OSTCQ9NRP0 149 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 TRAV8-6A0A0B4J262 113 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 ORM1P02763 201 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 S100A9P06702 114 aaKnown RBP6.01□□□□□ -1.45
USP28-205ENST00000537706 CRYBA4P53673 196 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 NDUFA6P56556 154 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 TMEM183BQ1AE95 376 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 LINC01556Q5JQF7 62 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 OR8A1Q8NGG7 326 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 BLNKQ8WV28 456 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 C8orf49Q96NF6 230 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 OTORQ9NRC9 128 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 EPDR1Q9UM22 224 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 RNF24Q9Y225 148 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 V9GYV3 84 aa6.01□□□□□ -1.45
USP28-205ENST00000537706 SLC25A5P05141 298 aaKnown RBP6□□□□□ -1.45
USP28-205ENST00000537706 HIST1H1EP10412 219 aaKnown RBP6□□□□□ -1.45
USP28-205ENST00000537706 RANP62826 216 aaKnown RBP6□□□□□ -1.45
USP28-205ENST00000537706 FAM231DQ6ZW35 169 aa6□□□□□ -1.45
USP28-205ENST00000537706 SH2D6Q7Z4S9 175 aa6□□□□□ -1.45
USP28-205ENST00000537706 BPIFA4PQ86YQ2 179 aa6□□□□□ -1.45
USP28-205ENST00000537706 C12orf57Q99622 126 aa6□□□□□ -1.45
USP28-205ENST00000537706 KLF12Q9Y4X4 402 aa6□□□□□ -1.45
USP28-205ENST00000537706 COX11Q9Y6N1 276 aa6□□□□□ -1.45
USP28-205ENST00000537706 SLC17A3O00476 420 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 LECT2O14960 151 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 IGHV3-53P01767 116 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 IGLC2P0DOY2 106 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 UBE2G1P62253 170 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 GNG5P63218 68 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 LAGE3Q14657 143 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 COA6Q5JTJ3 125 aaKnown RBP5.99□□□□□ -1.45
USP28-205ENST00000537706 IBA57Q5T440 356 aaKnown RBP5.99□□□□□ -1.45
USP28-205ENST00000537706 FMC1Q96HJ9 113 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 TRBV19A0A075B6N1 114 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 TRGV4A0A0C4DH28 118 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 PGPA6NDG6 321 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 IFITM10A6NMD0 228 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 TCRAP04437 139 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 MGST1P10620 155 aaKnown RBP5.99□□□□□ -1.45
USP28-205ENST00000537706 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 C9orf47Q6ZRZ4 202 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 BAGE2Q86Y30 109 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 HIST3H2BBQ8N257 126 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 LINC01600Q96MT4 127 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 RPH3ALQ9UNE2 315 aa5.99□□□□□ -1.45
USP28-205ENST00000537706 TRAV8-3A0A0A6YYJ7 113 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 K7EQD1 137 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 MRPS12O15235 138 aaKnown RBP5.98□□□□□ -1.45
USP28-205ENST00000537706 LTAP01374 205 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 S100A2P29034 98 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 RPL19P84098 196 aaKnown RBP5.98□□□□□ -1.45
USP28-205ENST00000537706 PDE6HQ13956 83 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 WFDC2Q14508 124 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 Q86TA4 180 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 TMEM183AQ8IXX5 376 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 RNF182Q8N6D2 247 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 ATP6V0E2Q8NHE4 81 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 RMI2Q96E14 147 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 LINC00479Q96M42 142 aa5.98□□□□□ -1.45
USP28-205ENST00000537706 RNASE7Q9H1E1 156 aaKnown RBP5.98□□□□□ -1.45
USP28-205ENST00000537706 TRAV34A0A0B4J273 112 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 TRBV6-1A0A0K0K1D8 114 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 SMIM27A0A1W2PRY6 76 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 COX19Q49B96 90 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 IGFL4Q6B9Z1 124 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 NHLRC2Q8NBF2 726 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 VGLL1Q99990 258 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 GSN-AS1Q9NRJ2 163 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 ZNF492Q9P255 531 aa5.97□□□□□ -1.45
USP28-205ENST00000537706 CRCT1Q9UGL9 99 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms