RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 RPL24P83731 157 aaKnown RBP6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 KIAA1644Q3SXP7 199 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 IBA57Q5T440 356 aaKnown RBP6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 MORN3Q6PF18 240 aaPredicted RBP6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 RNF125Q96EQ8 232 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 IGF2BP2-AS1Q96M15 143 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 NDFIP1Q9BT67 221 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 ERG28Q9UKR5 140 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 CYSLTR1Q9Y271 337 aa6.22□□□□□ -1.41
SFSWAP-202ENST00000535202 BIRC6Q9NR09 4857 aa6.21□□□□□ -1.41
SFSWAP-202ENST00000535202 IGHV1-24A0A0C4DH33 117 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 IGHV4-28A0A0C4DH34 117 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 BUB3O43684 328 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 GIG44P09565 113 aaPredicted RBP6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 SMIM13P0DJ93 91 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 HLA-DRB4P13762 266 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 ATP5IP56385 69 aaPredicted RBP6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 SNRPD3P62318 126 aaKnown RBP6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 TEPPQ6URK8 271 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 PQLC2Q6ZP29 291 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 HLA-DRB4X5D2U9 266 aa6.21□□□□□ -1.42
SFSWAP-202ENST00000535202 IGKV1D-37A0A075B6S9 117 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 hDV102S1A0JD36 115 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 J3KRW8 73 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 IGLV2-8P01709 118 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 GAGE5Q13069 117 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 GAGE6Q13070 117 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 Q8NAQ8 132 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 GTSF1Q8WW33 167 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 GFRA4Q9GZZ7 299 aa6.2□□□□□ -1.42
SFSWAP-202ENST00000535202 RBMY1A1P0DJD3 496 aaKnown RBP6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 RBMY1CP0DJD4 496 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 MIFP14174 115 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 TAS2R45P59539 299 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 HBBP68871 147 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 RBMY1FQ15415 496 aaKnown RBP6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 LGALS9BQ3B8N2 356 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 LINC01559Q495D7 138 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 LGALS9CQ6DKI2 356 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 URB1-AS1Q96HZ7 61 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 TRGV9Q99603 122 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 XCL2Q9UBD3 114 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 X6R8D5 127 aa6.19□□□□□ -1.42
SFSWAP-202ENST00000535202 IGKV1OR2-108A0A075B7D4 117 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 A0A1B0GW15 77 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 PRSS46E5RG02 174 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 E9PLD3 99 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 H3BMM0 161 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 IGKV3-20P01619 116 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 ID1P41134 155 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 CSN1S1P47710 185 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 DEFB1P60022 68 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 TAL2Q16559 108 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 GDF5OSQ5U4N7 250 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 THAP8Q8NA92 274 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 GATD1Q8NB37 220 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 CSNK1G2-AS1Q8NCQ2 148 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 NUP35Q8NFH5 326 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 MGST2Q99735 147 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 C1QTNF4Q9BXJ3 329 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 ZNF492Q9P255 531 aa6.18□□□□□ -1.42
SFSWAP-202ENST00000535202 TRBV7-9A0A0J9YWB2 115 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 IGLL5B9A064 214 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 SOCS3O14543 225 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 HLA-DMBP28068 263 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 FXYD7P58549 80 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 PRR20EP86478 221 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 PRR20CP86479 221 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 PRR20DP86480 221 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 PRR20BP86481 221 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 PRR20AP86496 221 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 MRPL32Q9BYC8 188 aaKnown RBP6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 PSG8Q9UQ74 426 aa6.17□□□□□ -1.42
SFSWAP-202ENST00000535202 VPS13DQ5THJ4 4388 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 IGHV3OR16-12A0A075B7B8 117 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 A8MWL6 223 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 ORM2P19652 201 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 TCTAP57738 103 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 Q6ZTC4 211 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 SPXQ9BT56 116 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 TM2D2Q9BX73 214 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 CELA1Q9UNI1 258 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 TNFRSF18Q9Y5U5 241 aa6.16□□□□□ -1.42
SFSWAP-202ENST00000535202 KMT2AQ03164 3969 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 DNAH6Q9C0G6 4158 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 TRAV10A0A0B4J240 114 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 F6UB75 175 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 H3BMG7 143 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 GCSAMLQ5JQS6 135 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 C16orf92Q96LL3 132 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 C20orf173Q96LM9 149 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 APLNQ9ULZ1 77 aa6.15□□□□□ -1.42
SFSWAP-202ENST00000535202 IGHV4-4A0A075B6R2 117 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 TMEM262E9PQX1 116 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 SPINK4O60575 86 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 SPINK8P0C7L1 97 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 MGST1P10620 155 aaKnown RBP6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 EMP1P54849 157 aa6.14□□□□□ -1.43
SFSWAP-202ENST00000535202 C12orf74Q32Q52 190 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms